Highlighting patterns of distribution and assembly of plants involves the use of community phylogenetic analyses and complementary traditional taxonomic metrics. However, these patterns are often unknown or in dispute, particularly along elevational gradients, with studies finding different patterns based on elevation. We investigated how patterns of tree diversity and structure change along an elevation gradient using taxonomic and phylogenetic diversity metrics. We sampled 595 individuals (36 families; 53 genera; 88 species) across 15 plots along an elevational gradient (2440–3330 m) in Ecuador. Seventy species were sequenced for the rbcL and matK gene regions to generate a phylogeny. Species richness, Shannon–Weaver diversity, Simpson’s Dominance, Simpson’s Evenness, phylogenetic diversity (PD), mean pairwise distance (MPD), and mean nearest taxon distance (MNTD) were evaluated for each plot. Values were correlated with elevation and standardized effect sizes (SES) of MPD and MNTD were generated, including and excluding tree fern species, for comparisons across elevation. Taxonomic and phylogenetic metrics found that species diversity decreases with elevation. We also found that overall the community has a non-random phylogenetic structure, dependent on the presence of tree ferns, with stronger phylogenetic clustering at high elevations. Combined, this evidence supports the ideas that tree ferns have converged with angiosperms to occupy the same habitat and that an increased filtering of clades has led to more closely related angiosperm species at higher elevations.

Three new species of Valeriana from southern Ecuador are described and illustrated. Valeriana plateadensis is found near the highest peak of Cerro Plateado in Cordillera del Cóndor at 2900 m a.s.l. and is recognized by the shrubby habit and sessile, densely imbricate, spatulate leaves and 3-lobed corollas. V. yacuriensis is found near Lagunas Negras de Jimbura in the Parque Nacional Yacurí at 3500 m a.s.l. and is recognized by the shrubby habit, petiolate leaves and 3-lobed corollas. V. xenophylloides is found in the Páramo de Patococha at 3400 m a.s.l. and is recognized by its cushion growth form, the crown of trichomes at the leaf apex and 3-lobed corollas.

Climate and atmospheric changes are impacting forest function and structure worldwide, but their effects on tropical forest diversity are unclear. Nowhere is the scientific challenge greater than in the Andes and the Amazon, which together include the world’s most diverse forests. Here, using 406 permanent plots spanning four decades of intact lowland and montane forest dynamics, we test for long-term change in species richness and assess the influence of climate and other variables. We show that, at a continental scale, species richness appears stable, but this masks substantial regional variation. Species richness increased in Northern Andean and Western Amazon plots, yet declined in the Central Andes, Guyana Shield and Central-Eastern Amazon. Overall, warmer, drier and more seasonal forests lost species, while those at higher elevations, in less fragmented areas and with faster rates of tree turnover experienced increases. Region-specific drivers, particularly precipitation seasonality and demographic factors, modulated these trends. The results highlight the diverse ways in which Amazon–Andes forests are changing and underscore the critical need to preserve large-scale ecosystem integrity to maintain local tree diversity. By doing so, Northern Andean forests in particular could serve as an important refuge for species increasingly displaced by climate change.