Ezgi Coban

Dr. Ezgi Coban

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 January 2026 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
BPBurak Paçacı
Burak Paçacı
EKErkam Kocaaslan
Erkam Kocaaslan
ADAhmet Demirel
Ahmet Demirel
FAFırat Akagündüz
Fırat Akagündüz
MTMustafa Alperen Tunç
Mustafa Alperen Tunç
NDNazım can Demircan
Nazım can Demircan
Background: Mucosal malignant melanoma (MMM) is a rare and aggressive malignancy with a dismal prognosis. While the Systemic Immune-Inflammation Index (SII) has emerged as a prognostic marker in various solid tumors, its specific value in MMM remains undefined. This study investigated the association between pretreatment SII and overall survival (OS) in patients with MMM. Methods: We retrospectively analyzed 106 adults with histologically confirmed MMM treated at six oncology centers in Turkey between 2005 and 2025. The baseline SII was calculated as platelet × neutrophil/lymphocyte counts obtained before definitive treatment. A receiver operating characteristic (ROC) analysis identified an optimal SII cutoff of 776 for overall survival (OS), defining low (<776) and high (≥776) SII groups. Results: Gastrointestinal and head and neck mucosa were the most frequent primary sites, and one-third of patients presented with metastatic disease. The median OS for the entire cohort was 23.3 months. Patients with a high versus low SII had a shorter OS (16.2 vs. 35.2 months; HR 2.71, 95% CI 1.67–4.40; p < 0.001). In multivariable analysis, a high SII (HR 1.88, 95% CI 1.12–3.14; p = 0.016), gastrointestinal primary site (HR 1.99, 95% CI 1.23–3.23; p = 0.005), and metastatic disease at diagnosis (HR 4.01, 95% CI 2.32–6.94; p < 0.001) independently predicted a worse OS. Conclusions: The SII is a novel, independent prognostic biomarker in MMM. Elevated pretreatment SII correlates with aggressive clinicopathologic features and inferior survival. As a readily accessible and cost-effective marker, SII may facilitate improved risk stratification in routine clinical practice for MMM patients.

16 January 2026 in Brain Sciences
Verified
Journal Article
Open access
PDF file
AÇAbdussamet Çelebi
Abdussamet Çelebi
BYBILAL YILDIRIM
BILAL YILDIRIM
EYEmine Yıldırım
Emine Yıldırım
SISelver Işık
Selver Işık
ECEzgi Coban
Ezgi Coban
MSMurat Sarı
Murat Sarı
Background: H3K27-altered diffuse midline glioma (DMG) is a highly aggressive central nervous system malignancy with limited therapeutic options and poor prognosis. Precision medicine strategies that integrate molecular profiling with individualized treatment selection represent a critical avenue for improving outcomes. Case presentation: We describe a 31-year-old woman with H3K27-altered DMG who, after standard chemoradiotherapy, was treated with a personalized, mechanism-guided combination regimen based on her tumor’s molecular profile. Next-generation sequencing identified pathogenic alterations in ATRX, H3F3A, and NF1, with a high NF1 mutation allelic fraction indicating RAS/MAPK pathway activation. Immunohistochemistry demonstrated elevated phosphorylated mTOR consistent with PI3K/AKT/mTOR pathway upregulation. The individualized regimen comprised trametinib and everolimus for dual pathway inhibition, the tissue-agnostic agent dordaviprone (ONC201), metabolic modulation with 2-deoxy-D-glucose, and electric field-based therapy. At seven months, MRI showed approximately a 60% volumetric reduction in the enhancing tumor component, accompanied by marked T2-weighted signal regression. Clinically, the patient remained neurologically intact with a Karnofsky Performance Score of 100%. Conclusions: This case illustrates the potential clinical value of a genomics-guided, multimodal treatment strategy in H3K27-altered DMG. The systematic integration of comprehensive molecular profiling with mechanistically rational treatment selection may contribute to meaningful radiological and clinical benefit in this otherwise uniformly fatal disease. These observations support further investigation of individualized, pathway-targeted approaches in prospective studies and N-of-1 trial frameworks.

2 January 2026 in Medicina
Verified
Journal Article
Open access
PDF file
EKErkam Kocaaslan
Erkam Kocaaslan
AGAli Kaan Güren
Ali Kaan Güren
FAFırat Akagündüz
Fırat Akagündüz
ADAhmet Demirel
Ahmet Demirel
MTMustafa Alperen Tunç
Mustafa Alperen Tunç
İBİbrahim Vedat Bayoğlu
İbrahim Vedat Bayoğlu
Background and Objectives: This study aimed to evaluate the prognostic impact of baseline body composition measurements and changes in muscle and adipose tissue during treatment on overall survival (OS) in metastatic non-small cell lung cancer (NSCLC) patients treated with nivolumab. Materials and Methods: Eighty-eight metastatic NSCLC patients who were initiated on nivolumab between January 2022 and December 2024 were retrospectively analyzed. Body composition parameters were derived from baseline and 3-month 18F-FDG PET/CT scans at the L3 level, including psoas muscle index (PMI), skeletal muscle index (SMI), intramuscular adipose content (IMAC), and subcutaneous fat density (SFD). Treatment-related changes in body composition were evaluated, and survival analyses were performed using Kaplan–Meier estimates and Cox regression models. Results: Overall, 34.1% (n = 30) of patients were classified as sarcopenic. Median OS was significantly longer in non-sarcopenic patients (19 months vs. 5 months, p < 0.001). In univariate analysis, older age, higher comorbidity burden, liver metastasis, baseline sarcopenia, and adverse treatment-related changes in muscle and nutritional parameters were found to be associated with OS. In multivariate analysis, only unfavorable changes in skeletal muscle (ΔSMI; HR 3.39, p = 0.003) and subcutaneous fat radiodensity (ΔSFD; HR 2.45, p = 0.02) remained independent adverse prognostic factors. Baseline body composition parameters did not maintain their independence in multivariate models. Conclusions: Our study demonstrates that muscle loss or insufficient gain and unfavorable changes in subcutaneous fat radiodensity during nivolumab treatment more strongly predict overall survival compared to baseline measurements. These findings highlight the clinical importance of monitoring dynamic body composition throughout treatment, rather than static assessments, in NSCLC patients receiving immunotherapy.

19 January 2026 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
EKErkam Kocaaslan
Erkam Kocaaslan
AGAli Kaan Güren
Ali Kaan Güren
FAFırat Akagündüz
Fırat Akagündüz
ADAhmet Demirel
Ahmet Demirel
MTMustafa Alperen Tunç
Mustafa Alperen Tunç
İBİbrahim Vedat Bayoğlu
İbrahim Vedat Bayoğlu
Background/Objectives: This study aimed to evaluate the prognostic value of 18F-FDG PET/CT-based secondary lymphoid organ metabolic ratios—spleen/liver (SLR), bone marrow/liver (BLR), and ileocecal region/liver (ILR)—and hematological inflammation markers (neutrophil/lymphocyte ratio [NLR] and systemic immune-inflammation index [SII]) obtained before nivolumab treatment in relation to survival in patients with advanced non-small cell lung cancer (NSCLC). Methods: This retrospective single-center study included 79 advanced NSCLC patients who were treated with nivolumab monotherapy at Marmara University Faculty of Medicine Hospital between 2022 and 2024. Pretreatment SLR, BLR, and ILR ratios were calculated from 18F-FDG PET/CT examinations; NLR and SII values were obtained from hematological data. Survival outcomes were analyzed using the Kaplan–Meier method, and prognostic factors were assessed using Cox proportional hazards regression analysis. In a subset of patients, an exploratory longitudinal analysis was performed using early follow-up PET/CT to assess follow-up-to-baseline changes in immune-organ metabolic ratios in relation to overall survival. Results: High NLR and SII levels were significantly associated with shorter progression-free survival and overall survival. In contrast, no significant associations were observed between PET/CT-derived metabolic ratios (SLR, BLR, and ILR) and survival. Multivariate analysis identified the presence of liver metastases and a high NLR as independent adverse prognostic factors for overall survival. Conclusions: In this homogeneous real-world cohort treated exclusively with single-agent nivolumab, PET/CT-derived secondary lymphoid organ metabolic ratios showed limited prognostic value at baseline and during early on-treatment assessment. In contrast, hematological inflammation markers, especially high NLR levels, are strong prognostic indicators of survival and may complement established clinical factors in risk stratification.

Verified
Journal Article
Open access
PDF file
MTMustafa Alperen Tunç
Mustafa Alperen Tunç
AGAli Kaan Güren
Ali Kaan Güren
BPBurak Paçacı
Burak Paçacı
FAFırat Akagündüz
Fırat Akagündüz
EKErkam Kocaaslan
Erkam Kocaaslan
MSMurat Sarı
Murat Sarı
Background: Adjuvant therapy decisions for T3N0 stage II colon cancer remain controversial. This study evaluates long-term outcomes, recurrence patterns, and conditional relapse-free survival (RFS) in pathologic T3N0 colon cancer. Methods: This retrospective study included 306 patients undergoing curative resection for T3N0 colonic adenocarcinoma (1995–2020). Early recurrence was defined as recurrence or death within 3 years after surgery. Survival was estimated via Kaplan–Meier. Cox regression, adjusted for treatment eras, evaluated survival factors. Inverse Probability of Treatment Weighting (IPTW) minimized selection bias. Conditional RFS utilized a 5-year landmark analysis. Results: Over a 133-month median follow-up, 72 patients (23.5%) recurred. Most recurrences (81.9%) occurred within 3 years; only 9.7% after 5 years. Five- and 10-year OS rates were 80.9% and 70.4%. Inadequate lymph node dissection (<12 nodes) was performed in 29.7% of the entire cohort and was found to be an independent adverse prognostic factor for OS. Adjuvant chemotherapy lacked overall OS benefit, though IPTW analysis suggested potential benefit in patients with inadequate dissection. Conditional RFS (5–10 years) for patients recurrence-free at 60 months was 95.0%. Exploratory analyses showed descriptive differences in post-relapse survival based on the clinical triggers prompting radiological evaluation (marker-triggered versus symptom-triggered presentations). Conclusions: T3N0 colon cancer recurrences occur predominantly within the first 3–5 years after surgery. Inadequate lymph node dissection is the primary adverse prognostic factor. Although a 5-year follow-up period appears adequate for most patients, individualized extended surveillance may be considered for selected high-risk patients. Adjuvant treatment and follow-up strategies should be tailored according to surgical quality and risk factors.

1 January 2024 in Eurasian Journal of Medical Advances
Verified
Journal Article
Closed access
ECEzgi Coban
Ezgi Coban
IAIzzet Hakkı Arıkan
Izzet Hakkı Arıkan
Objectives: Hyperuricemia is common in CKD patients. This retrospective study aimed to investigate the relationship between serum uric acid and the progression of CKD in stage 2 and 3 non-diabetic patients with CKD. Methods: The study sample included non-diabetic patients with stage 2 and 3 CKD, aged between 30 and 90 years, who were on nephrology follow-up for more than a year at our hospital. Serum uric acid levels recorded at presentation were considered baseline uric acid levels and annual eGFR, was calculated based on MDRD whereas BUN and blood creatinine values measured during patient visits were recorded retrospectively, as annual mean values. Results: 71 patients were included. Annual reductions in eGFR were significantly higher in male patients (3.8±4.7 ml/min/1.73 m²) compared to female patients (1.7±2.3 ml/min/1.73 m²) (p<0.032). In a multivariate linear regression analysis, the variables associated with annual reductions in eGFR measurements were baseline serum albumin level, baseline eGFR, and annual mean uric acid levels. No statistically significant differences were found between patients with hyperuricemia (n: 49) and patients without hyperuricemia (n: 22) in annual eGFR decline (2.9±4.5 vs. 2.0±2.71 ml/min/1.73 m², respectively; p=0.894) and annual eGFR decline in patients treated with allopurinol was comparable to those in patients who were not treated with allopurinol (2.2±2.4 vs. 3.2±4.3 ml/min/1.73 m², p=0.323; respectively). Conclusion: We couldn’t find any significant association between baseline serum uric acid levels and declines in eGFR. This finding reinforces the notion that hyperuricemia may arise from declining eGFR rather than accelerating CKD progression.