Nikhil Amnerkar

Dr. Nikhil Amnerkar

orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2020 in Acta Pharmaceutica Sinica B
Verified
Journal Article
Open access
NITIN BHARAT CHARBENITIN BHARAT CHARBE
NITIN BHARAT CHARBE
NANikhil Amnerkar
Nikhil Amnerkar
BRB. Ramesh
B. Ramesh
Murtaza TambuwalaMurtaza Tambuwala
Murtaza Tambuwala
HBHamid A. Bakshi
Hamid A. Bakshi
FZFlavia Zacconi
Flavia Zacconi
In many ways, cancer cells are different from healthy cells. A lot of tactical nano-based drug delivery systems are based on the difference between cancer and healthy cells. Currently, nanotechnology-based delivery systems are the most promising tool to deliver DNA-based products to cancer cells. This review aims to highlight the latest development in the lipids and polymeric nanocarrier for siRNA delivery to the cancer cells. It also provides the necessary information about siRNA development and its mechanism of action. Overall, this review gives us a clear picture of lipid and polymer-based drug delivery systems, which in the future could form the base to translate the basic siRNA biology into siRNA-based cancer therapies.

1 January 2010 in European Journal of Medicinal Chemistry
Verified
Journal Article
Closed access
NANikhil Amnerkar
Nikhil Amnerkar
KBKishore P. Bhusari
Kishore P. Bhusari

21 January 2011 in Journal of Enzyme Inhibition and Medicinal Chemistry
Verified
Journal Article
Open access
PDF file
NANikhil Amnerkar
Nikhil Amnerkar
KBKishore P. Bhusari
Kishore P. Bhusari
A series of 4-(6-substituted-1,3-benzothiazol-2-yl)amino-2-(4-substitutedphenyl)- amino-1,3-thiazoles, 9–24 have been synthesised from 2-chloro-N-(6-substituted-1,3-benzothiazol-2-yl)acetamides, 5–8. The structures of these compounds have been elucidated by spectral (IR, 1H NMR, Mass) and elemental (C, H, N) analysis data. All the newly synthesised compounds (9–24) were screened for their antibacterial, antifungal and anthelmintic activities. Almost all of these compounds showed moderate to good antimicrobial activity against two gram negative bacteria (E. coli, P. aeruginosa), two gram positive bacteria (S. aureus, B. subtilis), pathogenic fungal strains (C. albicans, A. niger) and good anthelmintic activity against earthworm species (P. corethruses). Compounds 18 and 20 exhibited good antibacterial and antifungal activities, while compound 22 displayed the most significant anthelmintic activity.

1 December 2020 in Journal of Molecular Structure
Verified
Journal Article
Closed access
SKSaurabh C. Khadse
Saurabh C. Khadse
NANikhil Amnerkar
Nikhil Amnerkar
KDKrushna S. Dighole
Krushna S. Dighole
ADAshish M. Dhote
Ashish M. Dhote
VPVikas R. Patil
Vikas R. Patil
VCVivekanand A. Chatpalliwar
Vivekanand A. Chatpalliwar

17 December 2019 in Future Journal of Pharmaceutical Sciences
Verified
Journal Article
Open access
PDF file
SKSaurabh C. Khadse
Saurabh C. Khadse
NANikhil Amnerkar
Nikhil Amnerkar
MDManasi U. Dave
Manasi U. Dave
DLDeepak Lokwani
Deepak Lokwani
RPRavindra R. Patil
Ravindra R. Patil
VCVivekanand A. Chatpalliwar
Vivekanand A. Chatpalliwar
Background: A small library of quinazolin-4-one clubbed thiazole acetates/acetamides lacking toxicity-producing functionalities was designed, synthesized, and evaluated for antidiabetic potential as glucokinase activators (GKA). Molecular docking studies were done in the allosteric site of the human glucokinase (PDB ID: 1V4S) enzyme to assess the binding mode and interactions of synthesized hits for best-fit conformations. All the compounds were evaluated by in vitro enzymatic assay for GK activation. Results: Data showed that compounds 3 (EC50 = 632 nM) and 4 (EC50 = 516 nM) showed maximum GK activation compared to the standards RO-281675 and piragliatin. Based on the results of the in vitro enzyme assay, docking studies, and substitution pattern, selected compounds were tested for their glucose-lowering effect in vivo by oral glucose tolerance test (OGTT) in normal rats. Compounds 3 (133 mg/dL) and 4 (135 mg/dL) exhibited prominent activity by lowering the glucose level to almost normal, eliciting the results in parallel to enzyme assay and docking studies. Binding free energy, hydrogen bonding, and π–π interactions of most active quinazolin-4-one derivatives 3 and 4 with key amino acid residues of the 1V4S enzyme were studied precisely. Preliminary in-silico absorption, distribution, metabolism, excretion, and toxicity (ADMET) prediction was carried out using SwissADME and PreADMET online software which revealed that all the compounds have the potential to become orally active antidiabetic agents as they obeyed Lipinski's rule of five. Conclusion: The results revealed that the designed lead could be significant for the strategic design of safe, effective, and orally bioavailable quinazolinone derivatives as glucokinase activators.

25 August 2021 in Journal of Biomolecular Structure and Dynamics
Verified
Journal Article
Closed access
ADAshish M. Dhote
Ashish M. Dhote
VPVikas R. Patil
Vikas R. Patil
DLDeepak Lokwani
Deepak Lokwani
NANikhil Amnerkar
Nikhil Amnerkar
VUVinod G. Ugale
Vinod G. Ugale
SKSaurabh C. Khadse
Saurabh C. Khadse
Severe acute respiratory syndrome coronavirus (SARS-CoV-2), a novel member of the betacoronavirus family is a single-stranded RNA virus that has spread worldwide prompting the World Health Organization to declare a global pandemic. This creates an alarming situation and generates an urgent need to develop innovative therapeutic agents. In this context, an in silico molecular docking and molecular dynamics (MD) simulation study on the existing 58 antiviral and antimalarial compounds was performed on 3CLpro, PLpro and RdRp SARS-CoV-2 proteins. The antiviral compounds are best fitted in the binding pockets and interact more profoundly with the amino acid residues compared to antimalarial compounds. An HIV protease inhibitor, saquinavir showed a good dock score and binding free energy with varied binding interactions against 3CLpro and PLpro. While, adefovir, a nucleotide HBV DNA polymerase inhibitor exhibited good dock score and binding interactions against RdRp. Although, the antimalarial compounds showed relatively less dock score but were found to be crucial in displaying essential binding interactions with these proteins. The MD simulation runs for 100 ns on 3CLpro–saquinavir, PLpro–saquinavir and RdRp–adefovir complexes using Desmond revealed fairly stable nature of interactions. This study helped in understanding the key interactions of the vital functionalities that provide a concrete base to develop lead molecules effective against SARS-CoV-2. Communicated by Ramaswamy H. Sarma