Katherine Koebel

Katherine Koebel

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 April 2025 in Nature Communications
Verified
Journal Article
Open access
PDF file
Mohammed NooruzzamanMohammed Nooruzzaman
Mohammed Nooruzzaman
LCLina M. Covaleda
Lina M. Covaleda
POPablo Sebastian Britto de Oliveira
Pablo Sebastian Britto de Oliveira
NMNicole H. Martin
Nicole H. Martin
KKKatherine Koebel
Katherine Koebel
DDDiego G. Diel
Diego G. Diel
The spillover of highly pathogenic avian influenza (HPAI) H5N1 virus to dairy cows and shedding of high amounts of infectious virus in milk raised public health concerns. Here, we evaluated the decay and thermal stability spectrum of HPAI H5N1 virus in raw milk. For the decay studies, HPAI H5N1 positive raw milk was incubated at different temperatures and viral titers and the decimal reduction time values (D-values) were estimated. We then heat-treated HPAI H5N1 virus positive milk using different thermal conditions including pasteurization and thermization conditions. Efficient inactivation of the virus (5-6 logs) was observed in all tested conditions, except for thermization at 50 °C for 10 min. Utilizing a submerged coil system with temperature ramp up times that resemble commercial pasteurizers, we showed that the virus was rapidly inactivated by pasteurization and most thermization conditions. These results provide important insights into the efficacy of thermal conditions and food safety measures utilized in the dairy industry.

21 September 2024 in bioRxiv
Verified
Preprint
Open access
PDF file
Mohammed NooruzzamanMohammed Nooruzzaman
Mohammed Nooruzzaman
LCLina M. Covaleda
Lina M. Covaleda
POPablo Sebastian Britto de Oliveira
Pablo Sebastian Britto de Oliveira
NMNicole H. Martin
Nicole H. Martin
KKKatherine Koebel
Katherine Koebel
DDDiego G. Diel
Diego G. Diel
The spillover of highly pathogenic avian influenza (HPAI) H5N1 virus to dairy cows and shedding of high amounts of infectious virus in milk raised public health concerns. Here, we evaluated the decay and thermal stability spectrum of HPAI H5N1 virus in raw milk. For the decay studies, HPAI H5N1 positive raw milk was incubated at different temperatures and viral titers and the thermal death time D-values were estimated. We then heat treated HPAI H5N1 virus positive milk following different thermal conditions including pasteurization and thermization conditions. Efficient inactivation of the virus was observed in all tested conditions, except for thermization at 50°C 10 min. Utilizing a submerged coil system with temperature ramp up times that resemble commercial pasteurizers, we showed that the virus was rapidly inactivated by pasteurization and most thermization conditions. These results provide important insights on the food safety measures utilized in the dairy industry.

1 May 2024 in JDS Communications
Verified
Journal Article
Open access
IFI.R. Frost
I.R. Frost
CSC.R. Seely
C.R. Seely
HMH.A. McCray
H.A. McCray
KCK.R. Callero
K.R. Callero
JSJ.A. Seminara
J.A. Seminara
JMJ.A.A. McArt
J.A.A. McArt
Although postpartum Ca supplementation strategies are often employed to prevent subclinical hypocalcemia in dairy cows, these strategies have produced a mix of beneficial, neutral, and detrimental results when assessing milk yield and subsequent disease outcomes. Because the mechanisms underlying these differing results are unknown, our objectives were to determine how common postpartum Ca supplementation strategies affect blood Ca concentrations and parathyroid hormone (PTH). We conducted a randomized controlled trial with 74 multiparous dairy cows on a commercial dairy in central New York. Cows were assigned to 1 of 4 supplementation groups immediately after calving: (1) control (CON; no Ca supplementation, n = 15); (2) conventional oral Ca supplementation (BOL-C; 43 g of oral Ca bolus administered immediately after calving and 24 h later, n = 17); (3) delayed oral Ca supplementation (BOL-D; 43 g of oral Ca bolus administered 48 and 72 h after calving, n = 15); or (4) subcutaneous infusion (SQ; 500 mL of 23% Ca borogluconate infused subcutaneously once immediately after calving, n = 15). Blood samples were collected immediately after calving (0 h) and at 8, 16, 24, 32, 40, 48, 56, 64, 72, 80, 88, 96, 120, and 168 h postpartum for a total of 15 blood samples per cow. Cows were excluded if administered Ca, via any route, by farm employees or if they died or were sold within 96 h following parturition, which left 62 cows for analysis. Linear mixed models, accounting for repeated measures, were created to analyze changes in serum total Ca (tCa) and PTH over the first 168 h after parturition and assess differences between supplementation groups. Serum tCa and PTH concentrations were not different at the time of calving among supplementation groups. There was a supplementation group by hour postcalving interaction for mean tCa concentration in which SQ cows had reduced tCa concentrations from 32 to 64 h compared with CON cows, 32 to 96 h compared with BOL-C cows, and 40 to 64 h compared with BOL-D cows. Mean PTH concentration did not differ among supplementation groups across 168 h after enrollment and was 158.1 pmol/L (95% confidence interval [CI] = 148.2 to 168.0) for CON cows, 164.0 pmol/L (95% CI = 154.9 to 173.1) for BOL-C cows, 158.7 pmol/L (95% CI = 149.2 to 168.1) for BOL-D cows, and 153.2 pmol/L (95% CI = 143.6 to 162.8) for SQ cows. Our findings suggest that although serum tCa does not differ between cows that receive conventional or delayed oral Ca bolus supplementation at calving and cows that receive no supplemental Ca, subcutaneous infusion of Ca at calving reduces serum tCa for a substantial period between 32 and 64 h postsupplementation. However, as PTH concentrations did not differ among groups across 168 h postpartum, the mechanism by which tCa is reduced remains unclear.

23 December 2024 in medRxiv
Verified
Preprint
Open access
PDF file
KKKatherine Koebel
Katherine Koebel
EBEce Bulut
Ece Bulut
SASamuel Alcaine
Samuel Alcaine
ATAljoša Trmčić
Aljoša Trmčić
Mohammed NooruzzamanMohammed Nooruzzaman
Mohammed Nooruzzaman
RIRenata Ivanek
Renata Ivanek
The spillover of H5N1 clade 2.3.4.4b into dairy cattle has raised concerns over the safety of fluid milk. While no foodborne infection has been reported in humans, this strain has infected at least 70 people and milk from infected cows is known to be infectious by ingestion in multiple other species. Investigation into the public health threat of this outbreak is warranted. This farm-to-table quantitative microbial risk assessment (QMRA) uses stochastic models to assess the risk of human infection from consumption of raw and pasteurized fluid cow’s milk from the United States supply chains. These models were parameterized with literature emerging from this outbreak, then employed to estimate the H5N1 infection risk and evaluate multiple potential interventions aimed at reducing this risk. The median (5 th , 95 th percentiles) probabilities of infection per 240-mL serving of pasteurized, farmstore-purchased raw, or retail-purchased raw milk were 7.66E-19 (2.39E-20, 4.02E-17), 1.56E-7 (6.67E-10, 1.28E-5), and 1.40E-7 (6.65E-10, 1.13E-05), respectively. Our results confirm that pasteurization is highly effective at reducing H5N1 infection risk. Scenario analysis revealed quantitative real-time reverse transcriptase-polymerase chain reaction (qrRT-PCR) testing of bulk tank milk to be an effective method for numerically reducing risk from raw milk. Additionally, we identify knowledge gaps related to human H5N1 dose-response by ingestion and raw milk consumption patterns. These findings emphasize the importance of mechanistic epidemiologic models for informing public health responses amidst outbreaks with foodborne potential and highlight the need for additional research into raw milk consumption patterns to better understand this exposure pathway.

23 June 2026 in Risk Analysis
Verified
Journal Article
Open access
KKKatherine Koebel
Katherine Koebel
EBEce Bulut
Ece Bulut
SASamuel D. Alcaine
Samuel D. Alcaine
ATAljoša Trmčić
Aljoša Trmčić
MNMohammed Nooruzzaman
Mohammed Nooruzzaman
RIRenata Ivanek
Renata Ivanek
The spillover of H5N1 clade 2.3.4.4b into dairy cattle has raised concerns over the safety of fluid milk. While no foodborne infection has been reported in humans, this strain has infected at least 70 people, and milk from infected cows is known to be infected by ingestion of multiple other species. Investigation into the public health threat of this outbreak is warranted. This farm‐to‐table quantitative microbial risk assessment (QMRA) uses stochastic models to assess the risk of human infection from consumption of raw and pasteurized fluid cow's milk from the United States supply chains. These models were parameterized with literature emerging from this outbreak and then employed to estimate the H5N1 infection risk and evaluate multiple potential interventions aimed at reducing this risk. The median (5th and 95th percentiles) probabilities of infection per 240‐mL serving of pasteurized, farmstore‐purchased raw, or retail‐purchased raw milk were 7.66E−19 (2.39E−20, 4.02E−17), 1.56E−7 (6.67E−10, 1.28E−5), and 1.40E−7 (6.65E−10, 1.13E−05), respectively. Our results confirm that pasteurization is highly effective at reducing H5N1 infection risk. Scenario analysis revealed quantitative real‐time reverse transcriptase‐polymerase chain reaction (qrRT‐PCR) testing of bulk tank milk to be an effective method for numerically reducing risk from raw milk. In addition, we identify knowledge gaps related to the human H5N1 dose‒response by ingestion and raw milk consumption patterns. These findings emphasize the importance of mechanistic epidemiologic models for informing public health responses amidst outbreaks with foodborne potential and highlight the need for additional research into raw milk consumption patterns to better understand this exposure pathway.

28 April 2023 in Veterinary Record Case Reports
Verified
Journal Article
Closed access
KKKatherine Koebel
Katherine Koebel
GPGarett B. Pearson
Garett B. Pearson
RRRolfe M. Radcliffe
Rolfe M. Radcliffe