Daniela Russo

Daniela Russo

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Research Focus & Metrics

Academic Career Length

30Years (1997-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 April 2003 in Physical Chemistry Chemical Physics
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Journal Article
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GHGreg Hura
Greg Hura
DRDaniela Russo
Daniela Russo
RGRobert M. Glaeser
Robert M. Glaeser
THTeresa Head-Gordon
Teresa Head-Gordon
MKMatthias Krack
Matthias Krack
MPMichele Parrinello
Michele Parrinello
We present high-quality X-ray scattering experiments on pure water taken over a temperature range of 2 to 77 °C using a synchrotron beam line at the advanced light source (ALS) at Lawrence Berkeley National Laboratory. The ALS X-ray scattering intensities are qualitatively different in trend of maximum intensity over this temperature range compared to older X-ray experiments. While the common procedure is to report both the intensity curve and radial distribution function(s), the proper extraction of the real-space pair correlation functions from the experimental scattering is very difficult due to uncertainty introduced in the experimental corrections, the proper weighting of OO, OH, and HH contributions, and numerical problems of Fourier transforming truncated data in Q-space. Instead, we consider the direct calculation of X-ray scattering spectra using electron densities derived from density functional theory based on real-space configurations generated with classical water models. The simulation of the experimental intensity is therefore definitive for determining radial distribution functions over a smaller Q-range. We find that the TIP4P, TIP5P and polarizable TIP4P-Pol2 water models, with DFT-LDA densities, show very good agreement with the experimental intensities, and TIP4P-Pol2 in particular shows quantitative agreement over the full temperature range. The resulting radial distribution functions from TIP4P-Pol2 provide the current best benchmarks for real-space water structure over the biologically relevant temperature range studied here.

1 March 2004 in Biophysical Journal
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Journal Article
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DRDaniela Russo
Daniela Russo
GHGreg Hura
Greg Hura
THTeresa Head-Gordon
Teresa Head-Gordon

8 June 2005 in The Journal of Physical Chemistry B
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Journal Article
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DRDaniela Russo
Daniela Russo
RMRajesh K. Murarka
Rajesh K. Murarka
JCJohn R. D. Copley
John R. D. Copley
THTeresa Head-Gordon
Teresa Head-Gordon

1 May 2001 in Journal of Molecular Biology
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Journal Article
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JPJ Pérez
J Pérez
PVP Vachette
P Vachette
DRDaniela Russo
Daniela Russo
MDM Desmadril
M Desmadril
DDD Durand
D Durand

1 July 2009 in Journal of The Royal Society Interface
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Journal Article
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Maria Grazia OrtoreMaria Grazia Ortore
Maria Grazia Ortore
FSFrancesco Spinozzi
Francesco Spinozzi
Paolo MarianiPaolo Mariani
Paolo Mariani
APalessandro Paciaroni
alessandro Paciaroni
LBLeandro R. S. Barbosa
Leandro R. S. Barbosa
DRDaniela Russo
Daniela Russo
Small-angle X-ray scattering (SAXS) and elastic and quasi-elastic neutron scattering techniques were used to investigate the high-pressure-induced changes on interactions, the low-resolution structure and the dynamics of lysozyme in solution. SAXS data, analysed using a global-fit procedure based on a new approach for hydrated protein form factor description, indicate that lysozyme completely maintains its globular structure up to 1500 bar, but significant modifications in the protein–protein interaction potential occur at approximately 600–1000 bar. Moreover, the mass density of the protein hydration water shows a clear discontinuity within this pressure range. Neutron scattering experiments indicate that the global and the local lysozyme dynamics change at a similar threshold pressure. A clear evolution of the internal protein dynamics from diffusing to more localized motions has also been probed. Protein structure and dynamics results have then been discussed in the context of protein–water interface and hydration water dynamics. According to SAXS results, the new configuration of water in the first hydration layer induced by pressure is suggested to be at the origin of the observed local mobility changes.

1 April 2014 in Current Protein & Peptide Science
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Journal Article
Open access
Maya Dimova LambrevaMaya Dimova Lambreva
Maya Dimova Lambreva
DRDaniela Russo
Daniela Russo
FPFabio Polticelli
Fabio Polticelli
VSViviana Scognamiglio
Viviana Scognamiglio
Amina AntonacciAmina Antonacci
Amina Antonacci
Giuseppina ReaGiuseppina Rea
Giuseppina Rea
Photosystem II (PSII) continuously attracts the attention of researchers aiming to unravel the riddle of its functioning and efficiency fundamental for all life on Earth. Besides, an increasing number of biotechnological applications have been envisaged exploiting and mimicking the unique properties of this macromolecular pigment-protein complex. The PSII organization and working principles have inspired the design of electrochemical water splitting schemes and charge separating triads in energy storage systems as well as biochips and sensors for environmental, agricultural and industrial screening of toxic compounds. An intriguing opportunity is the development of sensor devices, exploiting native or manipulated PSII complexes or ad hoc synthesized polypeptides mimicking the PSII reaction centre proteins as biosensing elements. This review offers a concise overview of the recent improvements in the understanding of structure and function of PSII donor side, with focus on the interactions of the plastoquinone cofactors with the surrounding environment and operational features. Furthermore, studies focused on photosynthetic proteins structure/function/dynamics and computational analyses aimed at rational design of high-quality bio-recognition elements in biosensor devices are discussed.