Xianting Ding

Prof. Xianting Ding

School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China
orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 September 2018 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
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YYYuting Yang
Yuting Yang
GSGuangxia Shen
Guangxia Shen
HWHui Wang
Hui Wang
HLHongxia Li
Hongxia Li
TZTing Zhang
Ting Zhang
HYHui Yu
Hui Yu
Significance: Exosomes are tiny vesicles secreted by cells that play an important role in cell-to-cell communication. The RNA, DNA, and proteins in exosomes are reported to be critical biomarkers for precision diagnostics and therapeutics. Exosome analysis thus offers an approach to learn health conditions without tissue biopsy. Clinical application and fundamental study of exosomes require analytical tools capable of physical and biochemical characterization. The challenge in developing such tools lies in that conventional optical microscopy is not suitable for exosome analysis due to its limited sensitivity. In this paper, we report a plasmonic microscopy capable of imaging single exosomes and quantitative analysis of physical (size) and biochemical (interaction with antibody) information.

27 April 2020 in ACS Sensors
Verified
Journal Article
Closed access
YWYunqing Wang
Yunqing Wang
YKYuqing Ke
Yuqing Ke
WLWenjia Liu
Wenjia Liu
YSYiqing Sun
Yiqing Sun
Xianting DingXianting Ding
Xianting Ding

23 December 2019 in Genome Biology
Verified
Journal Article
Open access
PDF file
XLXiao Liu
Xiao Liu
WSWeichen Song
Weichen Song
BWBrandon Y. Wong
Brandon Y. Wong
TZTing Zhang
Ting Zhang
SYShunying Yu
Shunying Yu
Xianting DingXianting Ding
Xianting Ding
Background: With the expanding applications of mass cytometry in medical research, a wide variety of clustering methods, both semi-supervised and unsupervised, have been developed for data analysis. Selecting the optimal clustering method can accelerate the identification of meaningful cell populations.Result: To address this issue, we compared three classes of performance measures, “precision” as external evaluation, “coherence” as internal evaluation, and stability, of nine methods based on six independent benchmark datasets. Seven unsupervised methods (Accense, Xshift, PhenoGraph, FlowSOM, flowMeans, DEPECHE, and kmeans) and two semi-supervised methods (Automated Cell-type Discovery and Classification and linear discriminant analysis (LDA)) are tested on six mass cytometry datasets. We compute and compare all defined performance measures against random subsampling, varying sample sizes, and the number of clusters for each method. LDA reproduces the manual labels most precisely but does not rank top in internal evaluation. PhenoGraph and FlowSOM perform better than other unsupervised tools in precision, coherence, and stability. PhenoGraph and Xshift are more robust when detecting refined sub-clusters, whereas DEPECHE and FlowSOM tend to group similar clusters into meta-clusters. The performances of PhenoGraph, Xshift, and flowMeans are impacted by increased sample size, but FlowSOM is relatively stable as sample size increases.Conclusion: All the evaluations including precision, coherence, stability, and clustering resolution should be taken into synthetic consideration when choosing an appropriate tool for cytometry data analysis. Thus, we provide decision guidelines based on these characteristics for the general reader to more easily choose the most suitable clustering tools.

8 December 2016 in Sensors
Verified
Journal Article
Open access
PDF file
SLShuopeng Liu
Shuopeng Liu
WSWenqiong Su
Wenqiong Su
Xianting DingXianting Ding
Xianting Ding
Glucose, as an essential substance directly involved in metabolic processes, is closely related to the occurrence of various diseases such as glucose metabolism disorders and islet cell carcinoma. Therefore, it is crucial to develop sensitive, accurate, rapid, and cost effective methods for frequent and convenient detections of glucose. Microfluidic Paper-based Analytical Devices (μPADs) not only satisfying the above requirements but also occupying the advantages of portability and minimal sample consumption, have exhibited great potential in the field of glucose detection. This article reviews and summarizes the most recent improvements in glucose detection in two aspects of colorimetric and electrochemical μPADs. The progressive techniques for fabricating channels on μPADs are also emphasized in this article. With the growth of diabetes and other glucose indication diseases in the underdeveloped and developing countries, low-cost and reliably commercial μPADs for glucose detection will be in unprecedentedly demand.

23 February 2024 in Nature Communications
Verified
Journal Article
Open access
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TYTianbao Ye
Tianbao Ye
CCCheng Chen
Cheng Chen
DWDi Wang
Di Wang
CHChengjie Huang
Chengjie Huang
ZYZhiwen Yan
Zhiwen Yan
CSChengxing Shen
Chengxing Shen
Effective therapeutic strategies for myocardial ischemia/reperfusion (I/R) injury remain elusive. Targeting reactive oxygen species (ROS) provides a practical approach to mitigate myocardial damage following reperfusion. In this study, we synthesize an antioxidant nanozyme, equipped with a single-Platinum (Pt)-atom (PtsaN-C), for protecting against I/R injury. PtsaN-C exhibits multiple enzyme-mimicking activities for ROS scavenging with high efficiency and stability. Mechanistic studies demonstrate that the excellent ROS-elimination performance of the single Pt atom center precedes that of the Pt cluster center, owing to its better synergistic effect and metallic electronic property. Systematic in vitro and in vivo studies confirm that PtsaN-C efficiently counteracts ROS, restores cellular homeostasis and prevents apoptotic progression after I/R injury. PtsaN-C also demonstrates good biocompatibility, making it a promising candidate for clinical applications. Our study expands the scope of single-atom nanozyme in combating ROS-induced damage and offers a promising therapeutic avenue for the treatment of I/R injury.

1 April 2018 in Biosensors and Bioelectronics
Verified
Journal Article
Closed access
SLShuopeng Liu
Shuopeng Liu
WSWenqiong Su
Wenqiong Su
YLYulong Li
Yulong Li
LZLulu Zhang
Lulu Zhang
Xianting DingXianting Ding
Xianting Ding