Tulip Nandu

Mr. Tulip Nandu

orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 May 2018 in Science
Verified
Journal Article
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KRKeun Woo Ryu
Keun Woo Ryu
TNTulip Nandu
Tulip Nandu
JKJiyeon Kim
Jiyeon Kim
SCSridevi Challa
Sridevi Challa
RDRalph J. DeBerardinis
Ralph J. DeBerardinis
WKW. Lee Kraus
W. Lee Kraus
Integrating glucose and fat: Consuming too much glucose makes you fat, but it is unclear how this conversion is mediated by the body. Glycolysis links to gene transcription via the essential coenzyme nicotinamide adenine dinucleotide in its oxidized state (NAD + ). Ryu et al. found that compartmentalized NAD + synthesis and consumption integrate glucose metabolism and adipogenic (fat-promoting) transcription during adipocyte differentiation (see the Perspective by Trefely and Wellen). Competition between the NAD + precursors—nuclear NMNAT-1 and cytosolic NMNAT-2—for their common substrate, nicotinamide mononucleotide, regulates the balance between nuclear NAD + synthesis for adipogenic gene regulation and cytosolic NAD + synthesis used in metabolism. Science , this issue p. eaan5780 ; see also p. 603

1 January 2017 in Molecular Cell
Verified
Journal Article
Closed access
XLXin Luo
Xin Luo
KRKeun Woo Ryu
Keun Woo Ryu
DKDae-Seok Kim
Dae-Seok Kim
TNTulip Nandu
Tulip Nandu
CMCarlos J. Medina
Carlos J. Medina
WKW. Lee Kraus
W. Lee Kraus

16 December 2016 in Nature Communications
Verified
Journal Article
Open access
KSKi-Hoon Song
Ki-Hoon Song
MPMi So Park
Mi So Park
TNTulip Nandu
Tulip Nandu
SGShrikanth Gadad
Shrikanth Gadad
SKSang-Cheol Kim
Sang-Cheol Kim
MKMi-Young Kim
Mi-Young Kim
Some polypeptide N-acetyl-galactosaminyltransferases (GALNTs) are associated with cancer, but their function in organ-specific metastasis remains unclear. Here, we report that GALNT14 promotes breast cancer metastasis to the lung by enhancing the initiation of metastatic colonies as well as their subsequent growth into overt metastases. Our results suggest that GALNT14 augments the self-renewal properties of breast cancer cells (BCCs). Furthermore, GALNT14 overcomes the inhibitory effect of lung-derived bone morphogenetic proteins (BMPs) on self-renewal and therefore facilitates metastasis initiation within the lung microenvironment. In addition, GALNT14 supports continuous growth of BCCs in the lung by not only inducing macrophage infiltration but also exploiting macrophage-derived fibroblast growth factors (FGFs). Finally, we identify KRAS-PI3K-c-JUN signalling as an upstream pathway that accounts for the elevated expression of GALNT14 in lung-metastatic BCCs. Collectively, our findings uncover an unprecedented role for GALNT14 in the pulmonary metastasis of breast cancer and elucidate the underlying molecular mechanisms.

21 December 2017 in Biology of Reproduction
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Journal Article
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AWAlexandra R Willcockson
Alexandra R Willcockson
TNTulip Nandu
Tulip Nandu
CLCheuk-Lun Liu
Cheuk-Lun Liu
SNShanmugasundaram Nallasamy
Shanmugasundaram Nallasamy
WKW Lee Kraus
W Lee Kraus
MMMala Mahendroo
Mala Mahendroo
With half a million babies born preterm each year in the United States and about 15 million worldwide, preterm birth remains a global health issue. Preterm birth (PTB) is a primary cause of infant morbidity and mortality and can impact lives long past infancy. The fact that there are numerous, and many currently unidentified, etiologies of PTB has hindered development of tools for risk evaluation and preventative therapies. Infection is estimated to be involved in nearly 40% of PTBs of known etiology; therefore, understanding how infection-mediated inflammation alters the cervical milieu and leads to preterm tissue biomechanical changes are questions of interest. Using RNA-seq we identified enrichment of components involved in inflammasome activation and unique proteases in the mouse cervix during LPS-mediated PTB and not physiologically at term before labor. Despite transcriptional induction of inflammasome components, there was no evidence of functional activation based on assessment of mature IL1B and IL18 proteins. The increased transcription of proteases that target both elastic fibers and collagen and concentration of myeloid-derived cells capable of protease synthesis in the cervical stroma support the structural disruption of elastic fibers as a functional output of protease activity. The recent demonstration that elastic fibers contribute to the biomechanical function of the pregnant cervix suggests their protease-induced disruption in the infection model of LPS-mediated PTB may contribute to premature loss of mechanical competency and preterm delivery. Collectively, the transcriptomics and ultrastructural data provide new insights into the distinct mechanisms of premature cervical remodeling in response to infection.

18 February 2016 in Scientific Reports
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Journal Article
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MDMasamichi Doiguchi
Masamichi Doiguchi
TNTakeya Nakagawa
Takeya Nakagawa
YIYuko Imamura
Yuko Imamura
MYMitsuhiro Yoneda
Mitsuhiro Yoneda
MHMiki Higashi
Miki Higashi
TITakashi Ito
Takashi Ito
Histone acetylation plays a pivotal role in transcriptional regulation, and ATP-dependent nucleosome remodeling activity is required for optimal transcription from chromatin. While these two activities have been well characterized, how they are coordinated remains to be determined. We discovered ATP-dependent histone H2A acetylation activity in Drosophila nuclear extracts. This activity was column purified and demonstrated to be composed of the enzymatic activities of CREB-binding protein (CBP) and SMARCAD1, which belongs to the Etl1 subfamily of the Snf2 family of helicase-related proteins. SMARCAD1 enhanced acetylation by CBP of H2A K5 and K8 in nucleosomes in an ATP-dependent fashion. Expression array analysis of S2 cells having ectopically expressed SMARCAD1 revealed up-regulated genes. Using native genome templates of these up-regulated genes, we found that SMARCAD1 activates their transcription in vitro. Knockdown analysis of SMARCAD1 and CBP indicated overlapping gene control, and ChIP-seq analysis of these commonly controlled genes showed that CBP is recruited to the promoter prior to SMARCAD1. Moreover, Drosophila genetic experiments demonstrated interaction between SMARCAD1/Etl1 and CBP/nej during development. The interplay between the remodeling activity of SMARCAD1 and histone acetylation by CBP sheds light on the function of chromatin and the genome-integrity network.

6 January 2025 in Journal of Cell Biology
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Journal Article
Open access
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SCSridevi Challa
Sridevi Challa
TNTulip Nandu
Tulip Nandu
HKHyung Bum Kim
Hyung Bum Kim
XGXuan Gong
Xuan Gong
CRCharles W. Renshaw
Charles W. Renshaw
WKW. Lee Kraus
W. Lee Kraus
Mono(ADP-ribosyl)ation (MARylation) is emerging as a critical regulator of ribosome function and translation. Herein, we demonstrate that RACK1, an integral component of the ribosome, is MARylated by the mono(ADP-ribosyl) transferase (MART) PARP14 in ovarian cancer cells. MARylation of RACK1 is required for stress granule formation and promotes the colocalization of RACK1 in stress granules with G3BP1, eIF3η, and 40S ribosomal proteins. In parallel, we observed reduced translation of a subset of mRNAs, including those encoding key cancer regulators (e.g., AKT). Treatment with a PARP14 inhibitor or mutation of the sites of MARylation on RACK1 blocks these outcomes, as well as the growth of ovarian cancer cells in culture and in vivo. To reset the system after prolonged stress and recovery, the ADP-ribosyl hydrolase TARG1 deMARylates RACK1, leading to the dissociation of the stress granules and the restoration of translation. Collectively, our results demonstrate a therapeutically targetable pathway that controls polysome assembly, translation, and stress granule dynamics in ovarian cancer cells.