Mark J Ratain

Prof. Mark J Ratain


Research Focus & Metrics

Academic Career Length

33Years (1994-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 June 2006 in Journal of Clinical Oncology
Verified
Journal Article
Closed access
MRMark J Ratain
Mark J Ratain
TETim Eisen
Tim Eisen
WSWalter M. Stadler
Walter M. Stadler
KFKeith T. Flaherty
Keith T. Flaherty
SKStan B. Kaye
Stan B. Kaye
POPeter J. O'Dwyer
Peter J. O'Dwyer
Purpose: This phase II randomized discontinuation trial evaluated the effects of sorafenib (BAY 43-9006), an oral multikinase inhibitor targeting the tumor and vasculature, on tumor growth in patients with metastatic renal cell carcinoma. Patients and Methods: Patients initially received oral sorafenib 400 mg twice daily during the initial run-in period. After 12 weeks, patients with changes in bidimensional tumor measurements that were less than 25% from baseline were randomly assigned to sorafenib or placebo for an additional 12 weeks; patients with ≥ 25% tumor shrinkage continued open-label sorafenib; patients with ≥ 25% tumor growth discontinued treatment. The primary end point was the percentage of randomly assigned patients remaining progression free at 24 weeks after the initiation of sorafenib. Results: Of 202 patients treated during the run-in period, 73 patients had tumor shrinkage of ≥ 25%. Sixty-five patients with stable disease at 12 weeks were randomly assigned to sorafenib (n = 32) or placebo (n = 33). At 24 weeks, 50% of the sorafenib-treated patients were progression free versus 18% of the placebo-treated patients (P = .0077). Median progression-free survival (PFS) from randomization was significantly longer with sorafenib (24 weeks) than placebo (6 weeks; P = .0087). Median overall PFS was 29 weeks for the entire renal cell carcinoma population (n = 202). Sorafenib was readministered in 28 patients whose disease progressed on placebo; these patients continued on sorafenib until further progression, for a median of 24 weeks. Common adverse events were skin rash/desquamation, hand-foot skin reaction, and fatigue; 9% of patients discontinued therapy, and no patients died from toxicity. Conclusion: Sorafenib has significant disease-stabilizing activity in metastatic renal cell carcinoma and is tolerable with chronic daily therapy.

1 January 2002 in The Pharmacogenomics Journal
Verified
Journal Article
Closed access
LIL Iyer
L Iyer
SDS Das
S Das
LJL Janisch
L Janisch
MWM Wen
M Wen
JRJ Ramírez
J Ramírez
MRMark J Ratain
Mark J Ratain

29 August 2007 in Clinical Pharmacology & Therapeutics
Verified
Journal Article
Closed access
PDF file
CHC M Hartford
C M Hartford
MRMark J Ratain
Mark J Ratain

27 November 2012 in Nature Reviews Genetics
Verified
Journal Article
Closed access
PDF file
HWHeather E. Wheeler
Heather E. Wheeler
MMMichael L. Maitland
Michael L. Maitland
MDM. Eileen Dolan
M. Eileen Dolan
NCNancy J. Cox
Nancy J. Cox
MRMark J Ratain
Mark J Ratain

1 January 2005 in Cancer Research
Verified
Journal Article
Open access
PDF file
WLWanqing Liu
Wanqing Liu
FIFederico Innocenti
Federico Innocenti
MWMichael H. Wu
Michael H. Wu
ADApurva A. Desai
Apurva A. Desai
MDM. Eileen Dolan
M. Eileen Dolan
MRMark J Ratain
Mark J Ratain
The epidermal growth factor receptor (EGFR) plays a prominent role in cell growth and development. Its regulation in humans is complex and incompletely understood. In this study, 12 new polymorphisms were discovered in the 5′-regulatory region of EGFR gene and 2 common single nucleotide polymorphisms (−216G/T and −191C/A) were found in the essential promoter area, one of which is located in a Sp1 recognition site (−216). Transient transfection in human cancer and primary cell lines showed significantly different promoter activity between the two most common haplotypes (−216G-191C and −216T-191C). The replacement of G by T at position −216 increases the promoter activity by 30%. A transient transfection assay in the Sp1-deficient cell line (Schneider cell line 2) showed a strong dependence of EGFR promoter activity on Sp1 and confirmed the effect of the aforementioned polymorphisms. Electrophoretic mobility shift assay also showed a significantly higher binding efficiency of nuclear protein or pure Sp1 protein to the T allele compared with the G allele. We then investigated the allelic imbalance of EGFR transcription in fibroblast cell lines with heterozygous genotype at −216G/T but C/C homozygous genotype at −191C/A. The expression of mRNA carrying T-C haplotype was significantly stronger compared with that of G-C haplotype (P < 0.02). Thus, we successfully showed that a common polymorphism in the EGFR promoter was associated with altered promoter activity and gene expression both in vitro and in vivo. Our findings have implications for cancer etiology and therapy and may also be relevant to the inherited susceptibility of other common diseases.

1 December 2002
Verified
Journal Article
Closed access
FIFederico Innocenti
Federico Innocenti
CGCarrie Grimsley
Carrie Grimsley
SDSoma Das
Soma Das
JRJacqueline Ramírez
Jacqueline Ramírez
CCCheng Cheng
Cheng Cheng
ARAnna Di Rienzo
Anna Di Rienzo
Genetic variation in UDP-glucuronosyltransferase 1A1 (UGT1A1)expression has several important clinical implications. UGT1A1 basal transcription is affected by a polymorphic (TA)n repeat, and another important regulatory element is the phenobarbital-responsive enhancer module (PBREM) which might contain variants affecting inducible gene expression. We assessed the extent of linkage disequilibrium between the (TA)n polymorphism and variants in the PBREM and UGT1A1 promoter. We also investigated the relationship between PBREM-(TA)n haplotypes and the glucuronidation rate of the UGT1A1 substrate SN-38. DNAs from 83 human livers were genotyped for the (TA)n polymorphism and microsomes from the same livers were phenotyped for SN-38 glucuronidation. The (TA)n polymorphism was genotyped in 24 additional African-Americans included in the Human Variation Panel (Coriell Institute). A 606-bp region spanning the PBREM was sequenced in 81 liver and a subset of 22 Human Variation Panel DNAs and six variants were found. The -3279G T and -3156G A variants are common (0.39 and 0.30, respectively). -3279G T is more common in Caucasians than African-Americans (P = 0.001). In Caucasians, linkage disequilibrium was highly significant between sites -3279, -3156, and the (TA)n polymorphism (P < 0.0001). In contrast, in African-Americans, only marginal levels of significance were observed between (TA)n and -3279 (P = 0.02) and between -3279 and -3156 (P = 0.04). Ten promoter haplotypes were identified. Haplotype I is the most common (0.39), from which haplotype II (0.15) differs at position -3279. SN-38G formation rates were correlated with (TA)n genotypes. This study showed that (i) common promoter variants are in linkage disequilibrium and (ii) the haplotype structure of promoter is probably different between Caucasians and African-Americans.