Marcin Pacholczyk

Dr. Marcin Pacholczyk

orcid

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
8 December 2022 in Cell Communication and Signaling
Verified
Journal Article
Open access
PDF file
PPPatrycja Przygodzka
Patrycja Przygodzka
KSKamila Soboska
Kamila Soboska
ESEwelina Sochacka
Ewelina Sochacka
MPMarcin Pacholczyk
Marcin Pacholczyk
MBMarcin Braun
Marcin Braun
JBJoanna Boncela
Joanna Boncela
Background: Neuromedin U (NMU) was identified as one of the hub genes closely related to colorectal cancer (CRC) progression and was recently shown to be a motility inducer in CRC cells. Its autocrine signalling through specific receptors increases cancer cell migration and invasiveness. Because of insufficient knowledge concerning NMU accessibility and action in the tumour microenvironment, its role in CRC remains poorly understood and its potential as a therapeutic target is still difficult to define. Methods: NMU expression in CRC tissue was detected by IHC. Data from The Cancer Genome Atlas were used to analyse gene expression in CRC. mRNA and protein expression was detected by real-time PCR, immunoblotting or immunofluorescence staining and analysed using confocal microscopy or flow cytometry. Proteome Profiler was used to detect changes in the profiles of cytokines released by cells constituting tumour microenvironment after NMU treatment. NMU receptor activity was monitored by detecting ERK1/2 activation. Transwell cell migration, wound healing assay and microtube formation assay were used to evaluate the effects of NMU on the migration of cancer cells, human macrophages and endothelial cells. Results: Our current study showed increased NMU levels in human CRC when compared to normal adjacent tissue. We detected a correlation between high NMUR1 expression and shorter overall survival of patients with CRC. We identified NMUR1 expression on macrophages, endothelial cells, platelets, and NMUR1 presence in platelet microparticles. We confirmed ERK1/2 activation by treatment of macrophages and endothelial cells with NMU, which induced pro-metastatic phenotypes of analysed cells and changed their secretome. Finally, we showed that NMU-stimulated macrophages increased the migratory potential of CRC cells. Conclusions: We propose that NMU is involved in the modulation and promotion of the pro-metastatic tumour microenvironment in CRC through the activation of cancer cells and other tumour niche cells, macrophages and endothelial cells.

1 February 2019 in European Journal of Medicinal Chemistry
Verified
Journal Article
Closed access
JMJacek Mularski
Jacek Mularski
Katarzyna MalarzKatarzyna Malarz
Katarzyna Malarz
MPMarcin Pacholczyk
Marcin Pacholczyk
Robert MusiolRobert Musiol
Robert Musiol

Verified
Journal Article
Open access
PDF file
CTCezary Treda
Cezary Treda
AWAneta Wlodarczyk
Aneta Wlodarczyk
MPMarcin Pacholczyk
Marcin Pacholczyk
ARAdrianna Rutkowska
Adrianna Rutkowska
ESEwelina Anna Stoczynska-Fidelus
Ewelina Anna Stoczynska-Fidelus
PRPiotr Rieske
Piotr Rieske
The number of glioblastoma (GB) cases is increasing every year, and the currently available therapies remain ineffective. A prospective antigen for GB therapy is EGFRvIII, an EGFR deletion mutant containing a unique epitope that is recognized by the L8A4 antibody used in CAR-T (chimeric antigen receptor T cell) therapy. In this study, we observed that the concomitant use of L8A4 with particular tyrosine kinase inhibitors (TKIs) does not impede the interaction between L8A4 and EGFRvIII; moreover, in this case, the stabilization of formed dimers results in increased epitope display. Unlike in wild-type EGFR, a free cysteine at position 16 (C16) is exposed in the extracellular structure of EGFRvIII monomers, leading to covalent dimer formation in the region of L8A4–EGFRvIII mutual interaction. Following in silico analysis of cysteines possibly involved in covalent homodimerization, we prepared constructs containing cysteine–serine substitutions of EGFRvIII in adjacent regions. We found that the extracellular part of EGFRvIII possesses plasticity in the formation of disulfide bridges within EGFRvIII monomers and dimers due to the engagement of cysteines other than C16. Our results suggest that the EGFRvIII-specific L8A4 antibody recognizes both EGFRvIII monomers and covalent dimers, regardless of the cysteine bridging structure. To summarize, immunotherapy based on the L8A4 antibody, including CAR-T combined with TKIs, can potentially increase the chances of success in anti-GB therapy.

26 February 2020 in Cancers
Verified
Journal Article
Open access
PDF file
Katarzyna MalarzKatarzyna Malarz
Katarzyna Malarz
JMJacek Mularski
Jacek Mularski
MPMarcin Pacholczyk
Marcin Pacholczyk
Robert MusiolRobert Musiol
Robert Musiol
Isocitrate dehydrogenases constitute a class of enzymes that are crucial for cellular metabolism. The overexpression or mutation of isocitrate dehydrogenases are often found in leukemias, glioblastomas, lung cancers, and ductal pancreatic cancer among others. Mutation R132H, which changes the functionality of an enzyme to produce mutagenic 2-hydroxyglutarate instead of a normal product, is particularly important in this field. A series of inhibitors were described for these enzymes of which ivosidenib was the first to be approved for treating leukemia and bile duct cancers in 2018. Here, we investigated the polypharmacological landscape of the activity for known sulfamoyl derivatives that are inhibitors, which are selective towards IDH1 R132H. These compounds appeared to be effective inhibitors of several non-receptor kinases at a similar level as imatinib and axitinib. The antiproliferative activity of these compounds against a panel of cancer cells was tested and is explained based on the relative expression levels of the investigated proteins. The multitargeted activity of these compounds makes them valuable agents against a wide range of cancers, regardless of the status of IDH1.

27 February 2016
Verified
Book Chapter
Closed access
PDF file
WBWojciech Bensz
Wojciech Bensz
DBDamian Borys
Damian Borys
KFKrzysztof Fujarewicz
Krzysztof Fujarewicz
KHKinga Herok
Kinga Herok
RJRoman Jaksik
Roman Jaksik
JSJaroslaw Smieja
Jaroslaw Smieja

6 January 2018 in Oncotarget
Verified
Journal Article
Open access
PDF file
WSWojciech Stec
Wojciech Stec
KRKamila Rosiak
Kamila Rosiak
CTCezary Treda
Cezary Treda
MSMaciej Smolarz
Maciej Smolarz
JPJoanna Peciak
Joanna Peciak
PRPiotr Rieske
Piotr Rieske
// <![CDATA[ $('.header-date').hide();$('#titleAuthors').hide();$('#abstractHeader').hide(); // ]]> Wojciech Stec1, #, Kamila Rosiak1, 2, #, Cezary Treda1, 2, Maciej Smolarz1, Joanna Peciak1, 2, Marcin Pacholczyk1, 3, Anna Lenart1, Dawid Grzela1, Ewelina Stoczynska-Fidelus1, 2, * and Piotr Rieske1, 2, 4, * 1Research and Development Unit, Celther Polska Ltd., Lodz, Poland 2Department of Tumor Biology, Medical University of Lodz, Lodz, Poland 3Institute of Automatic Control, Silesian University of Technology, Gliwice, Poland 4Research and Development Unit, Personather Ltd., Lodz, Poland #Contributed equally as first authors *Contributed equally as senior authors Correspondence to: Piotr Rieske, email: piotr.rieske@celther.com Keywords: EGFR; EGFRvIII; dimerization; phosphorylation Received: January 17, 2017 Accepted: December 29, 2017 Published: January 06, 2018 ABSTRACT Despite intensive research no therapies targeted against the oncogenic EGFRvIII are present in the clinic. One of the reasons is the elusive nature of the molecular structure and activity of the truncated receptor. The recent publications indicate the EGF-bound wild-type EGFR to trans-phosphorylate the EGFRvIII initiating aberrant signaling cascade. The elevated stability of the mutant receptor contributes towards oncogenic potential, preventing termination of signaling by receptor degradation. Here, we show that inhibition of phosphatases leads to a marked increase in phosphorylation of wild-type EGFR and EGFRvIII, indicating that both undergo cyclic rounds of phosphorylation and dephosphorylation on all investigated tyrosine residues, including Tyr1045. Still, we observe elevated stability of the mutant receptor, suggesting phosphorylation as insufficient to cause degradation. Hyperphosphorylation of EGFRvIII was hindered only by EGFR tyrosine kinase inhibitors. Co-immunoprecipitation as well as semi-native Western blotting structural analyses together with functional investigation of EGFRvIII’s phosphorylation following depletion of wild-type EGFR by shRNA or EGF-mediated degradation indicated homodimerization as the predominant quaternary structure of the mutant receptor. Dimers were observed only under non-reducing conditions, suggesting that homodimerization is mediated by covalent bonds. Previous reports indicated cysteine at position 16 to mediate covalent homodimerization. Upon its substitution to serine, we have observed impaired formation of dimers and lower phosphorylation levels of the mutated oncogene. Based on the obtained results we propose that EGFRvIII is predominantly regulated dynamically by phosphatases that counteract the process of trans-phosphorylation occurring within the homodimers.