Mümtaz Cem Şirin

Prof. Dr. Mümtaz Cem Şirin

orcid

Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2016 in Urology Research and Practice
Verified
Journal Article
Closed access
NYNisel Yılmaz
Nisel Yılmaz
NANeval Ağuş
Neval Ağuş
ABArzu Bayram
Arzu Bayram
PŞPınar Şamlıoğlu
Pınar Şamlıoğlu
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
SHSevgi Yılmaz Hancı
Sevgi Yılmaz Hancı
Objective: Urinary tract infections (UTIs) are among the most frequently seen community-acquired infections worldwide. E. coli causes 90% of urinary system infections. To guide the empirical therapy, the resistance pattern of E. coli responsible for community-acquired UTI was evaluated throughout a seven-year period in this study. Material and methods: The urine cultures of patients with urinary tract infections admitted to outpatient clinics between 1st January 2008 and 31st December 2014 were analyzed. Presence of ≥105 colony-forming units/mL in urine culture media was considered as significant for UTI. Isolated bacteria were identified by standard laboratory techniques or automated system VITEK2 (BioMerieux, France) and BD PhoenixTM 100 (BD, USA), as required. Antibiotic susceptibility testing was performed by Kirby-Bauer disk diffusion method using Clinical Laboratory Standard Institute (CLSI) criteria. Results: A total of 13281 uropathogens were isolated. Overall E. coli accounted for 8975 (67%) of all isolates. Resistance rates of E. coli to antimicrobial agents was demonstrated to be as follows: ampicillin 66.9%, cefazolin 30.9%, cefuroxime 30.9%, ceftazidime 14.9%, cefotaxime 28%, cefepime 12%, amoxicillin-clavulanic acid 36.9%, trimethoprim-sulfamethoxazole (TMP-SXT) 20%, ciprofloxacin 49.9%, amikacin 0.3%, gentamycin 24%, nitrofurantoin 0.9%, and fosfomycin 4.3%. There was no resistance to imipenem nor meropenem. The frequency of ESBL-producing E. coli strains was 24%. Conclusion: It is concluded that fosfomycin and nitrofurantoin are appropriate empirical therapy for community-acquired UTI empirical therapy, but the fluoroquinolones and the TMP-SXT shall not be used in the emprical treatment of UTI at this stage. In conclusion, as resistance rates show regional differences, it is necessary to regularly examine regional resistance rates to determine the appropriate empiric antibiotic treatment and national antibiotic usage policies must be reorganized according to data obtained from these studies.

1 September 2020 in Anais Brasileiros de Dermatologia
Verified
Journal Article
Open access
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
SKSelma Korkmaz
Selma Korkmaz
IEIjlal Erturan
Ijlal Erturan
BFBasak Filiz
Basak Filiz
BABuket Cicioglu Aridogan
Buket Cicioglu Aridogan
MYMehmet Yildirim
Mehmet Yildirim
Psoriasis is a chronic systemic inflammatory disease frequently associated with serious comorbidities. To investigate the systemic inflammatory burden in psoriasis and to assess the correlation between traditional and novel inflammatory markers and the severity of the disease. This cross-sectional study was conducted on 60 patients with psoriasis vulgaris and 50 healthy volunteers. Data including demographics, Psoriasis Area and Severity Index scores, and laboratory results were analyzed and compared. Compared with the control group, the psoriatic patients had significantly higher high sensitive C-reactive protein, serum amyloid A, erythrocyte sedimentation rate, leukocyte, neutrophil, neutrophil-to-lymphocyte ratio, monocyte to high density lipoprotein (HDL) cholesterol ratio, and aspartate aminotransferase levels, and significantly lower HDL cholesterol levels (p < 0.05). No significant difference was found in procalcitonin, lymphocyte, monocyte, hemoglobin, red blood cell distribution width, platelet, mean platelet volume, platelet distribution width, lymphocyte-to-monocyte ratio, anti-cyclic citrullinated peptide, glucose, alanine aminotransaminase, blood urea nitrogen, creatinine, triglyceride, total cholesterol, and LDL cholesterol levels between the two groups (p > 0.05). The Psoriasis Area and Severity Index score was positively correlated with high-sensitivity C-reactive protein, serum amyloid A, and monocyte to HDL cholesterol ratio, and negatively correlated with lymphocyte-to-monocyte ratio (p < 0.05). This was a single-center study with relatively limited numbers of patients and controls. The data show that high sensitivity C-reactive protein, serum amyloid A, erythrocyte sedimentation rate, neutrophil-to-lymphocyte ratio, and monocyte to HDL cholesterol ratio can be used as markers of systemic inflammation in patients with psoriasis. Moreover, high sensitivity C-reactive protein, serum amyloid A, monocyte to HDL cholesterol ratio and lymphocyte-to-monocyte ratio are closely related to the Psoriasis Area and Severity Index score, and they may be regarded as objective indicators in determining the disease severity.

1 July 2017 in Saudi Medical Journal
Verified
Journal Article
Open access
PDF file
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
NANeval Agus
Neval Agus
NYNisel Yilmaz
Nisel Yilmaz
ABArzu Bayram
Arzu Bayram
YDYeser K. Derici
Yeser K. Derici
GDGuliz Dogan
Guliz Dogan
Seroprevalence of Toxoplasma gondii, Rubella virus and Cytomegalovirus among pregnant women and the importance of avidity assays

22 August 2016 in Jundishapur Journal of Microbiology
Verified
Journal Article
Open access
PDF file
SGSafak Goktas
Safak Goktas
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
Background: Acute respiratory tract infection (ARTI) is one of the most common infections worldwide, causing significant morbidity and mortality. Objectives: This study was conducted to determine the prevalence and seasonal distribution of respiratory viruses in our region, in children and adults with a pre-diagnosis of ARTI. Methods: A total of 845 nasopharyngeal swab specimens were analyzed with the RespiFinder Smart 22 kit (PathoFinder BV, Netherlands) and the Rotor-Gene 6000 real-time PCR system. Results: At least one pathogen was detected in 612 (72.4%) of the specimens. Overall, 902 pathogens were detected; 821 (91%) were viruses and 81 (9%) were bacteria. The most commonly detected pathogens were influenza A virus (IFV-A) (n = 219), influenza B virus (IFV-B) (n=157), rhinovirus/enterovirus (n = 107), human bocavirus (HBoV) (n = 91), respiratory syncytial virus (RSV) A/B (n = 64), adenovirus (n = 56), human coronaviruses (n = 51), Mycoplasma pneumoniae (n = 49), parainfluenza viruses (n = 40), human metapneumovirus (n = 36), Bordetella pertussis (n = 15), Legionella pneumophila (n = 11), and Chlamydophila pneumoniae (n = 6), respectively. Among the 215 (25.4%) co-infected cases, IFV-A/HBoV and IFV-A/IFV-B were the most common co-infections. IFV-A was the most prevalent agent in all age groups except for children under 5 years of age, in whom RSV A/B was the most common pathogen. Approximately two thirds of the respiratory viruses were detected in early spring and winter, with peaks in January, March, and April. Conclusions: With regard to the prevalence and seasonal distribution of respiratory viruses, our epidemiological data for the 2014 - 2015 season in Istanbul showed a predominance of IFV-A infections with a peak activity in early spring. Enhanced surveillance and early detection of respiratory viral pathogens can be useful in the diagnosis, treatment, and prevention of ARTIs, and for guiding the development of appropriate public health strategies. Keywords: Respiratory Viruses; Acute Respiratory Tract Infection; Multiplex PCR

11 October 2023 in Journal of Basic Microbiology
Verified
Journal Article
Closed access
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
YCYasemin Cezaroğlu
Yasemin Cezaroğlu
EÇE. Sesli Çetin
E. Sesli Çetin
BABuket Arıdoğan
Buket Arıdoğan
DTDiğdem Trak
Diğdem Trak
YAYasin Arslan
Yasin Arslan

1 January 2017 in Turkish Bulletin of Hygiene and Experimental Biology
Verified
Journal Article
Closed access
MŞMümtaz Cem Şirin
Mümtaz Cem Şirin
NANeval Ağuş
Neval Ağuş
NYNisel Yılmaz
Nisel Yılmaz
ABArzu Bayram
Arzu Bayram
SHSevgi Yılmaz Hancı
Sevgi Yılmaz Hancı
GDGüliz Doğan
Güliz Doğan