Sinchan Banerjee

Dr. Sinchan Banerjee

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 February 2022 in International Journal of Systematic and Evolutionary Microbiology
Verified
Journal Article
Open access
ABAnna Bedics
Anna Bedics
SBSinchan Banerjee
Sinchan Banerjee
KBKároly Bóka
Károly Bóka
ETErika Tóth
Erika Tóth
TBTibor Benedek
Tibor Benedek
ATAndrás Táncsics
András Táncsics
Two Gram-reaction-negative strains, designated as B13T and MA2-2, were isolated from two different aromatic hydrocarbon-degrading enrichment cultures and characterized using a polyphasic approach to determine their taxonomic position. The two strains had identical 16S rRNA gene sequences and were most closely related to Pinisolibacter ravus E9T (97.36 %) and Siculibacillus lacustris SA-279T (96.33 %). Cells were facultatively aerobic rods and motile with a single polar flagellum. The strains were able to degrade ethylbenzene as sole source of carbon and energy. The assembled genome of strain B13T had a total length of 4.91 Mb and the DNA G+C content was 68.8 mol%. The predominant fatty acids (>5 % of the total) of strains B13T and MA2-2 were C18 : 1  ω7c/C18 : 1  ω6c, C16 : 1  ω7c/C16 : 1  ω6c and C16 : 0. The major ubiquinone of strain B13T was Q10, while the major polar lipids were phosphatidyl-N-methylethanolamine, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and a phospholipid. Based on phenotypic characteristics and phylogenetic data, it is concluded that strains B13T and MA2-2 are members of the genus Pinisolibacter and represent a novel species for which the name Pinisolibacter aquiterrae sp. nov. is proposed. The type strain of the species is strain B13T (=LMG 32346T=NCAIM B.02665T).

3 November 2025 in International Journal of Systematic and Evolutionary Microbiology
Verified
Journal Article
Open access
SBSinchan Banerjee
Sinchan Banerjee
ATAndrás Táncsics
András Táncsics
ZWZeqin Wu
Zeqin Wu
TSTudor Stafioiu
Tudor Stafioiu
JGJiacheng Gao
Jiacheng Gao
HSHendrik Schaefer
Hendrik Schaefer
A novel carbon monoxide (CO)-oxidizing bacterial strain designated as SB112 T was enriched and isolated from Ilex aquifolium leaves from Tocil Wood Nature Reserve in Coventry, UK. The strain was Gram reaction-negative, aerobic, rod-shaped, motile with a polar flagellum and non-spore-forming. Growth of strain SB112 T was observed at 10–45 °C, pH 6.0–12.0 and NaCl concentrations of 1–3%. The genomic DNA G+C content was 58.3 mol%, and the major fatty acids (>10%) of strain SB112 T were C 18 : 1 ω7c, C 18 : 1 ω7c 11-methyl and C 19 : 0 cyclo ω7c. Major polar lipids were phosphatidylcholine, diphosphatidylglycerol, phosphatidylglycerol and a phospholipid. Strain SB112ᵀ contains ubiquinone-10 as the major respiratory quinone. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain SB112 T formed a separate lineage within the family Phyllobacteriaceae , showing sequence identities of 97.7%, 97.6% and 97.5%, with its closest relatives Aminobacter niigataensis , Aminobacter aminovorans and Mesorhizobium plurifarium , respectively. Phylogenomic analyses using whole-genome sequences consistently placed this strain within the family Phyllobacteriaceae . However, its phylogenetic position did not correspond to any known genus within this family. The genome of strain SB112 T was found to possess the form II coxL gene, which encodes the large subunit of the CO dehydrogenase and potentially enables CO oxidation. The average nucleotide identity and digital DNA–DNA hybridization with members of closely related genera yielded values below the thresholds for prokaryotic species delineation (95–96 and 70%, respectively). Based on the phenotypic, chemotaxonomic, phylogenetic, genomic and physiological properties, strain SB112 T is considered to represent a novel species of a new genus Foliimonas within the family Phyllobacteriaceae for which the name Foliimonas ilicis gen. nov., sp. nov. is proposed. The type of strain is SB112 T (=LMG 33802 T , =NCAIM B.02691 T ).