Patrick Warren

Dr. Patrick Warren


Research Focus & Metrics

Academic Career Length

31Years (1996-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 December 2017 in Physical Review E
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RSRichard P. Sear
Richard P. Sear
PWPatrick Warren
Patrick Warren
A colloidal particle placed in an inhomogeneous solution of smaller nonadsorbing polymers will move towards regions of lower polymer concentration in order to reduce the free energy of the interface between the surface of the particle and the solution. This phenomenon is known as diffusiophoresis. Treating the polymer as penetrable hard spheres, as in the Asakura-Oosawa model, a simple analytic expression for the diffusiophoretic drift velocity can be obtained. In the context of drying films we show that diffusiophoresis by this mechanism can lead to stratification under easily accessible experimental conditions. By stratification we mean spontaneous formation of a layer of polymer on top of a layer of the colloid. Transposed to the case of binary colloidal mixtures, this offers an explanation for the stratification observed recently in these systems [A. Fortini et al., Phys. Rev. Lett. 116, 118301 (2016)]. Our results emphasize the importance of treating solvent dynamics explicitly in these problems and caution against the neglect of hydrodynamic interactions or the use of implicit solvent models in which the absence of solvent backflow results in an unbalanced osmotic force that gives rise to large but unphysical effects.

6 September 2017 in The Journal of Chemical Physics
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Journal Article
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Richard L. AndersonRichard L. Anderson
Richard L. Anderson
David J. BrayDavid J. Bray
David J. Bray
AFAndrea S. Ferrante
Andrea S. Ferrante
MNMassimo G. Noro
Massimo G. Noro
ISIan P. Stott
Ian P. Stott
PWPatrick Warren
Patrick Warren
We present a systematic, top-down, thermodynamic parametrization scheme for dissipative particle dynamics (DPD) using water-octanol partition coefficients, supplemented by water-octanol phase equilibria and pure liquid phase density data. We demonstrate the feasibility of computing the required partition coefficients in DPD using brute-force simulation, within an adaptive semi-automatic staged optimization scheme. We test the methodology by fitting to experimental partition coefficient data for twenty one small molecules in five classes comprising alcohols and poly-alcohols, amines, ethers and simple aromatics, and alkanes (i.e., hexane). Finally, we illustrate the transferability of a subset of the determined parameters by calculating the critical micelle concentrations and mean aggregation numbers of selected alkyl ethoxylate surfactants, in good agreement with reported experimental values.

16 March 2018 in Physical Review Applied
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Journal Article
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SSSangwoo Shin
Sangwoo Shin
PWPatrick Warren
Patrick Warren
HSHoward A. Stone
Howard A. Stone
Removing particles from fibrous materials involves loosening via surfactants followed by particle transfer in a flow. While flow advection is commonly believed to be the major driver for pore-scale transport, small pores within the fabric do not allow any significant fluid flow inside them, thus significantly reducing the role of advection. However, rinsing the fabric with fresh water naturally establishes a surfactant gradient within the pore space, providing a suitable environment for particles to undergo diffusiophoresis. We demonstrate that this mechanism can remove particles from deep within fabric pores at an accelerated rate. The nonlinear aspect of diffusiophoresis significantly prolongs the lifetime of the phoretic motion beyond the naive solute diffusion time scale during rinsing, allowing long-lasting, continuous removal of particles. Moreover, owing to the fine balance between chemiphoresis and electrophoresis for particles in anionic surfactant concentration gradients, we show that the particle removal is sensitive to the counterion mobility, suggesting a simple route to control the effect. We thus claim to have resolved the “stagnant core problem”—a long-standing mystery in laundry detergency—and have identified a physicochemical approach to particle transport in fibrous media with broad applicability.

12 October 2006 in The Journal of Chemical Physics
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PWPatrick Warren
Patrick Warren
STSorin Tănase-Nicola
Sorin Tănase-Nicola
PWPieter Rein Ten Wolde
Pieter Rein Ten Wolde
We present a simple method for determining the exact noise power spectra and related statistical properties for linear chemical reaction networks. The method is applied to reaction networks which are representative of biochemical processes such as gene expression. We find, for example, that a post-translational modification reaction can reduce the noise associated with gene expression. Our results also indicate how to coarse grain networks by the elimination of fast reactions. In this context we have discovered a breakdown of the sum rule which relates the noise power spectrum to the total noise. The breakdown can be quantified by a sum rule deficit, which is found to be universal, and can be attributed to the high-frequency noise in the fast reactions.

6 November 2017 in Soft Matter
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JAJesse T. Ault
Jesse T. Ault
PWPatrick Warren
Patrick Warren
SSSangwoo Shin
Sangwoo Shin
HSHoward A. Stone
Howard A. Stone
The diffusiophoretic motion of suspended colloidal particles under one-dimensional solute gradients is solved using numerical and analytical techniques. Similarity solutions are developed for the injection and withdrawal dynamics of particles into semi-infinite pores. Furthermore, a method of characteristics formulation of the diffusion-free particle transport model is presented and integrated to realize particle trajectories. Analytical solutions are presented for the limit of small particle diffusiophoretic mobility Γp relative to the solute diffusivity Ds for particle motions in both semi-infinite and finite domains. Results confirm the build up of local maxima and minima in the propagating particle front dynamics. The method of characteristics is shown to successfully predict particle motions and the position of the particle front, although it fails to accurately predict suspended particle concentrations in the vicinity of sharp gradients, such as at the particle front peak seen in some injection cases, where particle diffusion inevitably plays an important role. Results inform the design of applications in which the use of applied solute gradients can greatly enhance particle injection into and withdrawal from pores.

19 April 2013 in Physical Review E
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Journal Article
Closed access
PWPatrick Warren
Patrick Warren
Many body dissipative particle dynamics (MDPD) is a particle-based simulation method in which the interaction potential is a sum of self energies depending on locally sampled density variables. This functional form gives rise to density-dependent pairwise forces; however, not all such force laws are derivable from a potential, and the integrability condition for this to be the case provides a strong constraint. A strategy to assess the implications of this constraint is illustrated here by the derivation of a useful no-go theorem for multicomponent MDPD.