Tatsuo Shibata

Dr. Tatsuo Shibata

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Research Focus & Metrics

Academic Career Length

30Years (1997-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 June 2010 in Proceedings of the National Academy of Sciences
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Journal Article
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YAYoshiyuki Arai
Yoshiyuki Arai
TSTatsuo Shibata
Tatsuo Shibata
SMSatomi Matsuoka
Satomi Matsuoka
MSMasayuki J. Sato
Masayuki J. Sato
TYToshio Yanagida
Toshio Yanagida
MUMasahiro Ueda
Masahiro Ueda
Phosphatidylinositol (PtdIns) lipids have been identified as key signaling mediators for random cell migration as well as chemoattractant-induced directional migration. However, how the PtdIns lipids are organized spatiotemporally to regulate cellular motility and polarity remains to be clarified. Here, we found that self-organized waves of PtdIns 3,4,5-trisphosphate [PtdIns(3,4,5)P 3 ] are generated spontaneously on the membrane of Dictyostelium cells in the absence of a chemoattractant. Characteristic oscillatory dynamics within the PtdIns lipids signaling system were determined experimentally by observing the phenotypic variability of PtdIns lipid waves in single cells, which exhibited characteristics of a relaxation oscillator. The enzymes phosphatase and tensin homolog (PTEN) and phosphoinositide-3-kinase (PI3K), which are regulators for PtdIns lipid concentrations along the membrane, were essential for wave generation whereas functional actin cytoskeleton was not. Defects in these enzymes inhibited wave generation as well as actin-based polarization and cell migration. On the basis of these experimental results, we developed a reaction-diffusion model that reproduced the characteristic relaxation oscillation dynamics of the PtdIns lipid system, illustrating that a self-organization mechanism provides the basis for the PtdIns lipids signaling system to generate spontaneous spatiotemporal signals for random cell migration and that molecular noise derived from stochastic fluctuations within the signaling components gives rise to the variability of these spontaneous signals.

1 June 2013 in Cell
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Journal Article
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HIHidehiko Inomata
Hidehiko Inomata
TSTatsuo Shibata
Tatsuo Shibata
THTomoko Haraguchi
Tomoko Haraguchi
YSYoshiki Sasai
Yoshiki Sasai

29 December 2004 in Proceedings of the National Academy of Sciences
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Journal Article
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TSTatsuo Shibata
Tatsuo Shibata
KFKoichi Fujimoto
Koichi Fujimoto
Because intracellular processes are inherently noisy, stochastic reactions process noisy signals in cellular signal transduction. One essential feature of biological signal transduction systems is the amplification of small changes in input signals. However, small random changes in the input signals could also be amplified, and the transduction reaction can also generate noise. Here, we show theoretically how the abrupt response of ultrasensitive signal-transduction reactions results in the generation of large inherent noise and the high amplification of input noise. The inherently generated noise propagates with amplification through intracellular molecular network. We discuss how the contribution of such transmitted noise can be shown experimentally. Our results imply that the switch-like behavior of signal transduction could be limited by noise; however, high amplification reaction could be advantageous to generate large noise, which would be essential to maintain behavioral variability.

1 July 2007 in Biophysical Journal
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Journal Article
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MUMasahiro Ueda
Masahiro Ueda
TSTatsuo Shibata
Tatsuo Shibata

10 December 2015 in Nature Communications
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Journal Article
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KSKatsuhiko Sato
Katsuhiko Sato
THTetsuya Hiraiwa
Tetsuya Hiraiwa
EMEmi Maekawa
Emi Maekawa
AIAyako Isomura
Ayako Isomura
TSTatsuo Shibata
Tatsuo Shibata
EKErina Kuranaga
Erina Kuranaga
Morphogenetic epithelial movement occurs during embryogenesis and drives complex tissue formation. However, how epithelial cells coordinate their unidirectional movement while maintaining epithelial integrity is unclear. Here we propose a novel mechanism for collective epithelial cell movement based on Drosophila genitalia rotation, in which epithelial tissue rotates clockwise around the genitalia. We found that this cell movement occurs autonomously and requires myosin II. The moving cells exhibit repeated left–right-biased junction remodelling, while maintaining adhesion with their neighbours, in association with a polarized myosin II distribution. Reducing myosinID, known to cause counter-clockwise epithelial-tissue movement, reverses the myosin II distribution. Numerical simulations revealed that a left–right asymmetry in cell intercalation is sufficient to induce unidirectional cellular movement. The cellular movement direction is also associated with planar cell-shape chirality. These findings support a model in which left–right asymmetric cell intercalation within an epithelial sheet drives collective cellular movement in the same direction.

9 June 2021 in Nature
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Journal Article
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RMRitsuko Morita
Ritsuko Morita
NSNoriko Sanzen
Noriko Sanzen
HSHiroko Sasaki
Hiroko Sasaki
THTetsutaro Hayashi
Tetsutaro Hayashi
MUMana Umeda
Mana Umeda
HFHironobu Fujiwara
Hironobu Fujiwara