Antoine Dujon

Dr. Antoine Dujon

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 October 2016 in Ecosphere
Verified
Journal Article
Open access
PDF file
FCFredrik Christiansen
Fredrik Christiansen
ADAntoine Dujon
Antoine Dujon
KSKate R. Sprogis
Kate R. Sprogis
JAJohn P. Y. Arnould
John P. Y. Arnould
LBLars Bejder
Lars Bejder
An animal's body condition will affect its survival and reproductive success, which influences population dynamics. Despite its importance, relatively little is known about the body condition of large whales and its relationship to reproduction. We assessed the body condition of humpback whales (Megaptera novaeangliae) at a breeding/resting ground from aerial photographs recorded using an unmanned aerial vehicle (UAV). Photogrammetry methods were used to measure the surface area of individual whales, which was used as an index for body condition. Repeated measurements of the same individuals were not possible; hence, this study represents a cross‐sectional sample of the population. Intraseasonal changes in the body condition of four reproductive classes (calves, immature, mature, and lactating) were investigated to infer the relative energetic cost that each class faces during the breeding season. To better understand the costs of reproduction, we investigated the relationship between female body condition (FBC) and the linear growth and body condition of their dependent calves (CBC). We documented a linear decline in the body condition of mature whales (0.027 m2/d; n = 20) and lactating females (0.032 m2/d; n = 31) throughout the breeding season, while there was no change in body condition of immature whales (n = 51) and calves (n = 32). The significant decline in mature and lactating female's body condition implies substantial energetic costs for these reproductive classes. In support of this, we found a positive linear relationship between FBC and CBC. This suggests that females in poorer body condition may not have sufficient energy stores to invest as much energy into their offspring as better conditioned females without jeopardizing their own body condition and survival probability. Measurement precision was investigated from repeated measurements of the same animals both from the same and different photographs, and by looking at residual errors in relation to the positioning of the whales in the photographs. The resulting errors were included in a sensitivity analysis to demonstrate that model parameters were robust to measurement errors. Our findings provide strong support for the use of UAVs as a noninvasive tool to measure the body condition of whales and other mammals.

31 December 2020 in Evolutionary Applications
Verified
Journal Article
Open access
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ADAntoine Dujon
Antoine Dujon
AAAthena Aktipis
Athena Aktipis
Catherine Alix-PanabieresCatherine Alix-Panabieres
Catherine Alix-Panabieres
SASarah R. Amend
Sarah R. Amend
ABAmy M. Boddy
Amy M. Boddy
BUBeata Ujvari
Beata Ujvari
The application of evolutionary and ecological principles to cancer prevention and treatment, as well as recognizing cancer as a selection force in nature, has gained impetus over the last 50 years. Following the initial theoretical approaches that combined knowledge from interdisciplinary fields, it became clear that using the eco‐evolutionary framework is of key importance to understand cancer. We are now at a pivotal point where accumulating evidence starts to steer the future directions of the discipline and allows us to underpin the key challenges that remain to be addressed. Here, we aim to assess current advancements in the field and to suggest future directions for research. First, we summarize cancer research areas that, so far, have assimilated ecological and evolutionary principles into their approaches and illustrate their key importance. Then, we assembled 33 experts and identified 84 key questions, organized around nine major themes, to pave the foundations for research to come. We highlight the urgent need for broadening the portfolio of research directions to stimulate novel approaches at the interface of oncology and ecological and evolutionary sciences. We conclude that progressive and efficient cross‐disciplinary collaborations that draw on the expertise of the fields of ecology, evolution and cancer are essential in order to efficiently address current and future questions about cancer.

5 May 2021 in Remote Sensing in Ecology and Conservation
Verified
Journal Article
Open access
PDF file
ADAntoine Dujon
Antoine Dujon
DIDaniel Ierodiaconou
Daniel Ierodiaconou
JGJohanna J. Geeson
Johanna J. Geeson
JAJohn P. Y. Arnould
John P. Y. Arnould
BABlake M. Allan
Blake M. Allan
GSGail Schofield
Gail Schofield
Machine learning algorithms are being increasingly used to process large volumes of wildlife imagery data from unmanned aerial vehicles (UAVs); however, suitable algorithms to monitor multiple species are required to enhance efficiency. Here, we developed a machine learning algorithm using a low‐cost computer. We trained a convolutional neural network and tested its performance in: (1) distinguishing focal organisms of three marine taxa (Australian fur seals, loggerhead sea turtles and Australasian gannets; body size ranges: 0.8–2.5 m, 0.6–1.0 m, and 0.8–0.9 m, respectively); and (2) simultaneously delineating the fine‐scale movement trajectories of multiple sea turtles at a fish cleaning station. For all species, the algorithm performed best at detecting individuals of similar body length, displaying consistent behaviour or occupying uniform habitat (proportion of individuals detected, or recall of 0.94, 0.79 and 0.75 for gannets, seals and turtles, respectively). For gannets, performance was impacted by spacing (huddling pairs with offspring) and behaviour (resting vs. flying shapes, overall precision: 0.74). For seals, accuracy was impacted by morphology (sexual dimorphism and pups), spacing (huddling and creches) and habitat complexity (seal sized boulders) (overall precision: 0.27). For sea turtles, performance was impacted by habitat complexity, position in water column, spacing, behaviour (interacting individuals) and turbidity (overall precision: 0.24); body size variation had no impact. For sea turtle trajectories, locations were estimated with a relative positioning error of <50 cm. In conclusion, we demonstrate that, while the same machine learning algorithm can be used to survey multiple species, no single algorithm captures all components optimally within a given site. We recommend that, rather than attempting to fully automate detection of UAV imagery data, semi‐automation is implemented (i.e. part automated and part manual, as commonly practised for photo‐identification). Approaches to enhance the efficiency of manual detection are required in parallel to the development of effective implementation of machine learning algorithms.

29 November 2016 in Marine Biology
Verified
Journal Article
Closed access
PDF file
FCFredrik Christiansen
Fredrik Christiansen
NENicole Esteban
Nicole Esteban
JMJeanne A. Mortimer
Jeanne A. Mortimer
ADAntoine Dujon
Antoine Dujon
GHGraeme C. Hays
Graeme C. Hays

1 July 2020 in iScience
Verified
Journal Article
Open access
ADAntoine Dujon
Antoine Dujon
RGRobert A. Gatenby
Robert A. Gatenby
GBGeorgina Bramwell
Georgina Bramwell
NMNick MacDonald
Nick MacDonald
EDErin Dohrmann
Erin Dohrmann
BUBeata Ujvari
Beata Ujvari
Inter-individual transmission of cancer cells represents an intriguing and unexplored host-pathogen system, with significant ecological and evolutionary ramifications. The pathogen consists of clonal malignant cell lines that spread horizontally as allografts and/or xenografts. Although only nine transmissible cancer lineages in eight host species from both terrestrial and marine environments have been investigated, they exhibit evolutionary dynamics that may provide novel insights into tumor-host interactions particularly in the formation of metastases. Here we present an overview of known transmissible cancers, discuss the necessary and sufficient conditions for cancer transmission, and provide a comprehensive review on the evolutionary dynamics between transmissible cancers and their hosts.

9 March 2020 in Evolutionary Applications
Verified
Journal Article
Open access
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Rodrigo HamedeRodrigo Hamede
Rodrigo Hamede
RORachel Owen
Rachel Owen
HSHannah Siddle
Hannah Siddle
SPSarah Peck
Sarah Peck
MJMenna Jones
Menna Jones
Frederic ThomasFrederic Thomas
Frederic Thomas
Ecological and evolutionary concepts have been widely adopted to understand host–pathogen dynamics, and more recently, integrated into wildlife disease management. Cancer is a ubiquitous disease that affects most metazoan species; however, the role of oncogenic phenomena in eco‐evolutionary processes and its implications for wildlife management and conservation remains undeveloped. Despite the pervasive nature of cancer across taxa, our ability to detect its occurrence, progression and prevalence in wildlife populations is constrained due to logistic and diagnostic limitations, which suggests that most cancers in the wild are unreported and understudied. Nevertheless, an increasing number of virus‐associated and directly transmissible cancers in terrestrial and aquatic environments have been detected. Furthermore, anthropogenic activities and sudden environmental changes are increasingly associated with cancer incidence in wildlife. This highlights the need to upscale surveillance efforts, collection of critical data and developing novel approaches for studying the emergence and evolution of cancers in the wild. Here, we discuss the relevance of malignant cells as important agents of selection and offer a holistic framework to understand the interplay of ecological, epidemiological and evolutionary dynamics of cancer in wildlife. We use a directly transmissible cancer (devil facial tumour disease) as a model system to reveal the potential evolutionary dynamics and broader ecological effects of cancer epidemics in wildlife. We provide further examples of tumour–host interactions and trade‐offs that may lead to changes in life histories, and epidemiological and population dynamics. Within this framework, we explore immunological strategies at the individual level as well as transgenerational adaptations at the population level. Then, we highlight the need to integrate multiple disciplines to undertake comparative cancer research at the human–domestic–wildlife interface and their environments. Finally, we suggest strategies for screening cancer incidence in wildlife and discuss how to integrate ecological and evolutionary concepts in the management of current and future cancer epizootics.