Jason Blackburn

Dr. Jason Blackburn

Spatial Epidemiology & Ecology Research Laboratory, Department of Geography & Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA
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Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 May 2019 in Nature Microbiology
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Journal Article
Closed access
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CCColin J. Carlson
Colin J. Carlson
IKIan T. Kracalik
Ian T. Kracalik
NRNoam Ross
Noam Ross
KAKathleen A. Alexander
Kathleen A. Alexander
MHMartin E. Hugh-Jones
Martin E. Hugh-Jones
JBJason Blackburn
Jason Blackburn

6 August 2022 in Microorganisms
Verified
Journal Article
Open access
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BKBerzhan Kurmanov
Berzhan Kurmanov
DZDiansy Zincke
Diansy Zincke
WSWanwen Su
Wanwen Su
THTed L. Hadfield
Ted L. Hadfield
AAAlim Masgutovich Aikimbayev
Alim Masgutovich Aikimbayev
JBJason Blackburn
Jason Blackburn
Brucellosis is one of the most important and widespread bacterial zoonoses worldwide. Cases are reported annually across the range of known infectious species of the genus Brucella. Globally, Brucella melitensis, primarily hosted by domestic sheep and goats, affects large proportions of livestock herds, and frequently spills over into humans. While some species, such as Brucella abortus, are well controlled in livestock in areas of North America, the Greater Yellowstone Ecosystem supports the species in native wild ungulates with occasional spillover to livestock. Elsewhere in North America, other Brucella species still infect domestic dogs and feral swine, with some associated human cases. Brucella spp. patterns vary across space globally with B. abortus and B. melitensis the most important for livestock control. A myriad of other species within the genus infect a wide range of marine mammals, wildlife, rodents, and even frogs. Infection in humans from these others varies with geography and bacterial species. Control in humans is primarily achieved through livestock vaccination and culling and requires accurate and rapid species confirmation; vaccination is Brucella spp.-specific and typically targets single livestock species for distribution. Traditional bacteriology methods are slow (some media can take up to 21 days for bacterial growth) and often lack the specificity of molecular techniques. Here, we summarize the molecular techniques for confirming and identifying specific Brucella species and provide recommendations for selecting the appropriate methods based on need, sensitivity, and laboratory capabilities/technology. As vaccination/culling approaches are costly and logistically challenging, proper diagnostics and species identification are critical tools for targeting surveillance and control.

9 March 2010 in PLOS ONE
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Journal Article
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AJAndrew Joyner
Andrew Joyner
LLLarissa Lukhnova
Larissa Lukhnova
YPYerlan Pazilov
Yerlan Pazilov
GTGulnara Temiralyeva
Gulnara Temiralyeva
MHMartin E. Hugh-Jones
Martin E. Hugh-Jones
JBJason Blackburn
Jason Blackburn
Anthrax, caused by the bacterium Bacillus anthracis, is a zoonotic disease that persists throughout much of the world in livestock, wildlife, and secondarily infects humans. This is true across much of Central Asia, and particularly the Steppe region, including Kazakhstan. This study employed the Genetic Algorithm for Rule-set Prediction (GARP) to model the current and future geographic distribution of Bacillus anthracis in Kazakhstan based on the A2 and B2 IPCC SRES climate change scenarios using a 5-variable data set at 55 km2 and 8 km2 and a 6-variable BioClim data set at 8 km2. Future models suggest large areas predicted under current conditions may be reduced by 2050 with the A2 model predicting ∼14–16% loss across the three spatial resolutions. There was greater variability in the B2 models across scenarios predicting ∼15% loss at 55 km2, ∼34% loss at 8 km2, and ∼30% loss with the BioClim variables. Only very small areas of habitat expansion into new areas were predicted by either A2 or B2 in any models. Greater areas of habitat loss are predicted in the southern regions of Kazakhstan by A2 and B2 models, while moderate habitat loss is also predicted in the northern regions by either B2 model at 8 km2. Anthrax disease control relies mainly on livestock vaccination and proper carcass disposal, both of which require adequate surveillance. In many situations, including that of Kazakhstan, vaccine resources are limited, and understanding the geographic distribution of the organism, in tandem with current data on livestock population dynamics, can aid in properly allocating doses. While speculative, contemplating future changes in livestock distributions and B. anthracis spore promoting environments can be useful for establishing future surveillance priorities. This study may also have broader applications to global public health surveillance relating to other diseases in addition to B. anthracis.

1 November 2016 in Applied Geography
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Journal Article
Closed access
LMLillian R. Morris
Lillian R. Morris
KPKelly M. Proffitt
Kelly M. Proffitt
JBJason Blackburn
Jason Blackburn

17 April 2019 in PLOS Neglected Tropical Diseases
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Journal Article
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CLCatherine Lippi
Catherine Lippi
ASAnna M. Stewart-Ibarra
Anna M. Stewart-Ibarra
MLM. E. Franklin Bajaña Loor
M. E. Franklin Bajaña Loor
JZJose E. Dueñas Zambrano
Jose E. Dueñas Zambrano
NLNelson A. Espinoza Lopez
Nelson A. Espinoza Lopez
Sadie Jane RyanSadie Jane Ryan
Sadie Jane Ryan
Arboviral disease transmission by Aedes mosquitoes poses a major challenge to public health systems in Ecuador, where constraints on health services and resource allocation call for spatially informed management decisions. Employing a unique dataset of larval occurrence records provided by the Ecuadorian Ministry of Health, we used ecological niche models (ENMs) to estimate the current geographic distribution of Aedes aegypti in Ecuador, using mosquito presence as a proxy for risk of disease transmission. ENMs built with the Genetic Algorithm for Rule-Set Production (GARP) algorithm and a suite of environmental variables were assessed for agreement and accuracy. The top model of larval mosquito presence was projected to the year 2050 under various combinations of greenhouse gas emissions scenarios and models of climate change. Under current climatic conditions, larval mosquitoes were not predicted in areas of high elevation in Ecuador, such as the Andes mountain range, as well as the eastern portion of the Amazon basin. However, all models projected to scenarios of future climate change demonstrated potential shifts in mosquito distribution, wherein range contractions were seen throughout most of eastern Ecuador, and areas of transitional elevation became suitable for mosquito presence. Encroachment of Ae. aegypti into mountainous terrain was estimated to affect up to 4,215 km2 under the most extreme scenario of climate change, an area which would put over 12,000 people currently living in transitional areas at risk. This distributional shift into communities at higher elevations indicates an area of concern for public health agencies, as targeted interventions may be needed to protect vulnerable populations with limited prior exposure to mosquito-borne diseases. Ultimately, the results of this study serve as a tool for informing public health policy and mosquito abatement strategies in Ecuador. The yellow fever mosquito (Aedes aegypti) is a medically important vector of arboviral diseases in Ecuador, such as dengue fever and chikungunya. Managing Ae. aegypti is a challenge to public health agencies in Latin America, where the use of limited resources must be planned in an efficient, targeted manner. The spatial distribution of Ae. aegypti can be used as a proxy for risk of disease exposure, guiding policy formation and decision-making. We used ecological niche models in this study to predict the range of Ae. aegypti in Ecuador, based on agency larval mosquito surveillance records and layers of environmental predictors (e.g. climate, elevation, and human population). The best models of current range were then projected to the year 2050 under a variety of greenhouse gas emissions scenarios and models of climate change. All modeled future scenarios predicted shifts in the range of Ae. aegypti, allowing us to assess human populations that may be at risk of becoming exposed to Aedes vectored diseases. As climate changes, we predict that communities living in areas of transitional elevation along the Andes mountain range are vulnerable to the expansion of Ae. aegypti.

19 August 2013 in PLOS ONE
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Journal Article
Open access
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JMJocelyn C. Mullins
Jocelyn C. Mullins
GGGiuliano Garofolo
Giuliano Garofolo
MEMatthew Van Ert
Matthew Van Ert
AFAntonio Fasanella
Antonio Fasanella
LLLarisa Lukhnova
Larisa Lukhnova
JBJason Blackburn
Jason Blackburn
We modeled the ecological niche of a globally successful Bacillus anthracis sublineage in the United States, Italy and Kazakhstan to better understand the geographic distribution of anthrax and potential associations between regional populations and ecology. Country-specific ecological-niche models were developed and reciprocally transferred to the other countries to determine if pathogen presence could be accurately predicted on novel landscapes. Native models accurately predicted endemic areas within each country, but transferred models failed to predict known occurrences in the outside countries. While the effects of variable selection and limitations of the genetic data should be considered, results suggest differing ecological associations for the B. anthracis populations within each country and may reflect niche specialization within the sublineage. Our findings provide guidance for developing accurate ecological niche models for this pathogen; models should be developed regionally, on the native landscape, and with consideration to population genetics. Further genomic analysis will improve our understanding of the genetic-ecological dynamics of B. anthracis across these countries and may lead to more refined predictive models for surveillance and proactive vaccination programs. Further studies should evaluate the impact of variable selection of native and transferred models.