Rodrigo Ligabue-Braun

Dr. Rodrigo Ligabue-Braun

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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2018 in Journal of Advanced Research
Verified
Journal Article
Open access
KKKarine Kappaun
Karine Kappaun
APAngela Regina Piovesan
Angela Regina Piovesan
Célia R. CarliniCélia R. Carlini
Célia R. Carlini
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun
Urease (urea amidohydrolase, EC 3.5.1.5) is a nickel-containing enzyme produced by plants, fungi, and bacteria that catalyzes the hydrolysis of urea into ammonia and carbamate. Urease is of historical importance in Biochemistry as it was the first enzyme ever to be crystallized (1926). Finding nickel in urease's active site (1975) was the first indication of a biological role for this metal. In this review, historical and structural features, kinetics aspects, activation of the metallocenter and inhibitors of the urea hydrolyzing activity of ureases are discussed. The review also deals with the non-enzymatic biological properties, whose discovery 40 years ago started a new chapter in the study of ureases. Well recognized as virulence factors due to the production of ammonia and alkalinization in diseases by urease-positive microorganisms, ureases have pro-inflammatory, endocytosis-inducing and neurotoxic activities that do not require ureolysis. Particularly relevant in plants, ureases exert insecticidal and fungitoxic effects. Data on the jack bean urease and on jaburetox, a recombinant urease-derived peptide, have indicated that interactions with cell membrane lipids may be the basis of the non-enzymatic biological properties of ureases. Altogether, with this review we wanted to invite the readers to take a second look at ureases, very versatile proteins that happen also to catalyze the breakdown of urea into ammonia and carbamate.

1 October 2021 in Journal of Chemical Information and Modeling
Verified
Journal Article
Closed access
PAPablo R. Arantes
Pablo R. Arantes
MPMarcelo D. Polêto
Marcelo D. Polêto
CPConrado Pedebos
Conrado Pedebos
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun

12 December 2015 in Toxicon
Verified
Journal Article
Closed access
Célia R. CarliniCélia R. Carlini
Célia R. Carlini
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun

1 June 2012 in Toxicon
Verified
Journal Article
Closed access
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun
HVHugo Verli
Hugo Verli
Célia R. CarliniCélia R. Carlini
Célia R. Carlini

Verified
Journal Article
Open access
PDF file
AMAnne H. S. Martinelli
Anne H. S. Martinelli
FLFernanda Cortez Lopes
Fernanda Cortez Lopes
EJElisa B. O. John
Elisa B. O. John
Célia R. CarliniCélia R. Carlini
Célia R. Carlini
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun
Intrinsically disordered proteins (IDPs) do not have rigid 3D structures, showing changes in their folding depending on the environment or ligands. Intrinsically disordered proteins are widely spread in eukaryotic genomes, and these proteins participate in many cell regulatory metabolism processes. Some IDPs, when aberrantly folded, can be the cause of some diseases such as Alzheimer′s, Parkinson′s, and prionic, among others. In these diseases, there are modifications in parts of the protein or in its entirety. A common conformational variation of these IDPs is misfolding and aggregation, forming, for instance, neurotoxic amyloid plaques. In this review, we discuss some IDPs that are involved in neurodegenerative diseases (such as beta amyloid, alpha synuclein, tau, and the “IDP-like” PrP), cancer (p53, c-Myc), and diabetes (amylin), focusing on the structural changes of these IDPs that are linked to such pathologies. We also present the IDP modulation mechanisms that can be explored in new strategies for drug design. Lastly, we show some candidate drugs that can be used in the future for the treatment of diseases caused by misfolded IDPs, considering that cancer therapy has more advanced research in comparison to other diseases, while also discussing recent and future developments in this area of research. Therefore, we aim to provide support to the study of IDPs and their modulation mechanisms as promising approaches to combat such severe diseases.

9 February 2015 in The FEBS Journal
Verified
Journal Article
Open access
PDF file
VFVanessa Feder
Vanessa Feder
LKLívia Kmetzsch
Lívia Kmetzsch
CSCharley Christian Staats
Charley Christian Staats
NVNatalia Vidal‐Figueiredo
Natalia Vidal‐Figueiredo
RLRodrigo Ligabue-Braun
Rodrigo Ligabue-Braun
MVMarilene Vainstein
Marilene Vainstein
Ureases (EC 3.5.1.5) are Ni2+‐dependent metalloenzymes produced by plants, fungi and bacteria that hydrolyze urea to produce ammonia and CO2. The insertion of nickel atoms into the apo‐urease is better characterized in bacteria, and requires at least three accessory proteins: UreD, UreF, and UreG. Our group has demonstrated that ureases possess ureolytic activity‐independent biological properties that could contribute to the pathogenicity of urease‐producing microorganisms. The presence of urease in pathogenic bacteria strongly correlates with pathogenesis in some human diseases. Some medically important fungi also produce urease, including Cryptococcus neoformans and Cryptococcus gattii. C. gattii is an etiological agent of cryptococcosis, most often affecting immunocompetent individuals. The cryptococcal urease might play an important role in pathogenesis. It has been proposed that ammonia produced via urease action might damage the host endothelium, which would enable yeast transmigration towards the central nervous system. To analyze the role of urease as a virulence factor in C. gattii, we constructed knockout mutants for the structural urease‐coding gene URE1 and for genes that code the accessory proteins Ure4 and Ure6. All knockout mutants showed reduced multiplication within macrophages. In intranasally infected mice, the ure1Δ (lacking urease protein) and ure4Δ (enzymatically inactive apo‐urease) mutants caused reduced blood burdens and a delayed time of death, whereas the ure6Δ (enzymatically inactive apo‐urease) mutant showed time and dose dependency with regard to fungal burden. Our results suggest that C. gattii urease plays an important role in virulence, in part possibly through enzyme activity‐independent mechanism(s).