Thomas Birkballe Hansen

Thomas Birkballe Hansen


Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 February 2013 in Nature
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Journal Article
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THThomas Birkballe Hansen
Thomas Birkballe Hansen
TJTrine I. Jensen
Trine I. Jensen
BCBettina Hjelm Clausen
Bettina Hjelm Clausen
JBJesper B. Bramsen
Jesper B. Bramsen
BFBente Finsen
Bente Finsen
JKJørgen Kjems
Jørgen Kjems

8 August 2019 in Nature Reviews Genetics
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Journal Article
Closed access
LKLasse Kristensen
Lasse Kristensen
MAMaria S. Andersen
Maria S. Andersen
LSLotte V. W. Stagsted
Lotte V. W. Stagsted
KEKaroline K. Ebbesen
Karoline K. Ebbesen
THThomas Birkballe Hansen
Thomas Birkballe Hansen
JKJørgen Kjems
Jørgen Kjems

9 October 2017 in Oncogene
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Journal Article
Open access
LKLasse Kristensen
Lasse Kristensen
THThomas Birkballe Hansen
Thomas Birkballe Hansen
MVM T Venø
M T Venø
JKJ Kjems
J Kjems
Circular RNA (circRNA) is a novel member of the noncoding cancer genome with distinct properties and diverse cellular functions, which is being explored at a steadily increasing pace. The list of endogenous circRNAs involved in cancer continues to grow; however, the functional relevance of the vast majority is yet to be discovered. In general, circRNAs are exceptionally stable molecules and some have been shown to function as efficient microRNA sponges with gene-regulatory potential. Many circRNAs are highly conserved and have tissue-specific expression patterns, which often do not correlate well with host gene expression. Here we review the current knowledge on circRNAs in relation to their implications in tumorigenesis as well as their potential as diagnostic and prognostic biomarkers and as possible therapeutic targets in future personalized medicine. Finally, we discuss future directions for circRNA cancer research and current caveats, which must be addressed to facilitate the translation of basic circRNA research into clinical use.

30 September 2011 in The EMBO Journal
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Journal Article
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THThomas Birkballe Hansen
Thomas Birkballe Hansen
EWErik D Wiklund
Erik D Wiklund
JBJesper B Bramsen
Jesper B Bramsen
SVSune B Villadsen
Sune B Villadsen
ASAaron L Statham
Aaron L Statham
JKJørgen Kjems
Jørgen Kjems
MicroRNAs (miRNAs) are ∼22 nt non‐coding RNAs that typically bind to the 3′ UTR of target mRNAs in the cytoplasm, resulting in mRNA destabilization and translational repression. Here, we report that miRNAs can also regulate gene expression by targeting non‐coding antisense transcripts in human cells. Specifically, we show that miR‐671 directs cleavage of a circular antisense transcript of the Cerebellar Degeneration‐Related protein 1 ( CDR1 ) locus in an Ago2‐slicer‐dependent manner. The resulting downregulation of circular antisense has a concomitant decrease in CDR1 mRNA levels, independently of heterochromatin formation. This study provides the first evidence for non‐coding antisense transcripts as functional miRNA targets, and a novel regulatory mechanism involving a positive correlation between mRNA and antisense circular RNA levels. There is a [Have you seen?][1] (November 2011) associated with this Article. [1]: http://dx.doi.org/10.1038/emboj.2011.373

15 September 2013 in Cancer Research
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THThomas Birkballe Hansen
Thomas Birkballe Hansen
JKJørgen Kjems
Jørgen Kjems
CDChristian Damgaard
Christian Damgaard
MicroRNAs (miRNA) play important roles in fine-tuning gene expression and are often deregulated in cancer. The identification of competing endogenous RNA and circular RNA (circRNA) as important regulators of miRNA activity underscores the increasing complexity of ncRNA-mediated regulatory networks. Particularly, the recently identified circular RNA, ciRS-7, which acts as a designated miR-7 inhibitor/sponge, has conceptually changed the mechanistic understanding of miRNA networks. As miR-7 modulates the expression of several oncogenes, disclosing the regulation of miR-7 activity will likely advance the understanding of various cancer etiologies. Here, we review the current knowledge about the ciRS-7/miR-7 axis in cancer-related pathways and discuss possible models explaining the relevance of coexpressing miR-7 along with a circRNA inhibitor. Cancer Res; 73(18); 5609–12. ©2013 AACR.

1 January 2016 in Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
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Journal Article
Closed access
KEKaroline K. Ebbesen
Karoline K. Ebbesen
JKJørgen Kjems
Jørgen Kjems
THThomas Birkballe Hansen
Thomas Birkballe Hansen