This study aimed to determine the factors affecting plankton structure along a salinity gradient during the summer in high-altitude endorheic lakes in Catamarca Province (Argentina). During the summer 2013, eight lakes located between 3000 and 4300 meters above sea level were sampled in a 6-day period being analysed plankton, limnological variables and flamingo abundance. Principal Component Analysis explained 80% of the system variability, permitting lakes to be ordered by salinity: subhaline (SH), hypohaline (HH) and mesohaline (MH). A total of 101 phytoplankton taxa were registered, having Bacillariophyceae the highest richness (43 species registered). HH lakes were dominated by Bacillariophyceae (between 65 and 100%), while Chlorophyceae and Euglenophyceae were more abundant in SH and MH lakes. Zooplankton was poorly represented in richness (only 21 species were registered). MH lakes were dominated by Copepoda (>85% of total abundance) and HH lakes by Rotifera (>51% of total abundance). It was not found a clear pattern in SH lakes. The redundancy analysis explained 70.7% of phytoplankton variability and 75.7% of zooplankton variability. Bacillariophyceae presence was associated with availability of dissolved silica (Si), while Euglenophyceae and Chlorophyceae were associated with a higher nitrogen:phosphorus ratio. Cladocera and Copepoda abundance were linked to Euglenophyceae abundance and the area of lakes while Rotifera displayed a positive relation with the concentration of dissolved organic matter. We conclude that both phytoplankton and zooplankton abundance are mainly controlled by Bottom-Up forces including dissolved Si for Bacillariophyceae, and availability of Euglenophyceae for zooplankton while salinity and altitude have an effect on plankton richness distribution. In spite of high altitude salt lakes are important water supply resources and very sensitive systems to climatic change; they have been poorly studied in South America. In this study we found that altitude and salinity mainly regulate richness while Bottom-Up forces are the main factors which control plankton abundance.

High-elevation wetlands in South America are not well described despite their high sensitivity to human impact and unique biodiversity. We describe the hydroclimatological and limnological characteristics of 21 wetlands on the High Andean Plateau of Argentina, synthesizing information gathered over ten years (2010–2020). We collected physical-chemical, phytoplankton, and zooplankton data and counted flamingos in each wetland. We also conducted an extensive analysis of climatic patterns and hydrological responses since 1985. These wetlands are shallow, with a wide range of salinity (from fresh to brine), mostly alkaline, and are dominated by carbonate and gypsum deposits and sodium-chloride waters. They tend to have high nutrient concentrations. Plankton shows a low species richness and moderate to high dominance of taxa. Flamingos are highly dependent on the presence of Bacillariophyta, which appears to be positively linked to silica and soluble reactive phosphorus availability. Climatic conditions show a strong region-wide increase in average air temperature since the mid-1980s and a decrease in precipitation between 1985–1999 and 2000–2020. These high-elevation wetlands are fundamentally sensitive systems; therefore, having baseline information becomes imperative to understanding the impact of climatic changes and other human perturbations. This work attempts to advance the body of scientific knowledge of these unique wetland systems.