Dominik Vodnik

Dominik Vodnik

orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2008 in Science of The Total Environment
Verified
Journal Article
Closed access
DVDominik Vodnik
Dominik Vodnik
HGH. Grčman
H. Grčman
IMI. Maček
I. Maček
JEJ.T. van Elteren
J.T. van Elteren
MKM. Kovačevič
M. Kovačevič

19 September 2015 in BMC Genomics
Verified
Journal Article
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TSTjaša Stare
Tjaša Stare
Živa RamšakŽiva Ramšak
Živa Ramšak
ABAndrej Blejec
Andrej Blejec
KSKatja Stare
Katja Stare
NTNeža Turnšek
Neža Turnšek
KGKristina Gruden
Kristina Gruden
Potato virus Y (PVY) is a major pathogen that causes substantial economic losses in worldwide potato production. Different potato cultivars differ in resistance to PVY, from severe susceptibility, through tolerance, to complete resistance. The aim of this study was to better define the mechanisms underlying tolerant responses of potato to infection by the particularly aggressive PVYNTN strain. We focused on the dynamics of the primary metabolism-related processes during PVYNTN infection. A comprehensive analysis of the dynamic changes in primary metabolism was performed, which included whole transcriptome analysis, nontargeted proteomics, and photosynthetic activity measurements in potato cv. Désirée and its transgenic counterpart depleted for accumulation of salicylic acid (NahG-Désirée). Faster multiplication of virus occurred in the NahG-Désirée, with these plants developing strong disease symptoms. We show that while the dynamics of responses at the transcriptional level are extensive and bimodal, this is only partially translated to the protein level, and to the final functional outcome. Photosynthesis-related genes are transiently induced before viral multiplication is detected and it is down-regulated later on. This is reflected as a deficiency of the photosynthetic apparatus at the onset of viral multiplication only. Interestingly, specific and constant up-regulation of some RuBisCO transcripts was detected in Désirée plants, which might be important, as these proteins have been shown to interact with viral proteins. In SA-deficient and more sensitive NahG-Désirée plants, consistent down-regulation of photosynthesis-related genes was detected. A constant reduction in the photochemical efficiency from the onset of viral multiplication was identified; in nontransgenic plants this decrease was only transient. The transient reduction in net photosynthetic rate occurred in both genotypes with the same timing, and coincided with changes in stomatal conductivity. Down-regulation of photosynthesis-related gene expression and decreased photosynthetic activity is in line with other studies that have reported the effects of biotic stress on photosynthesis. Here, we additionally detected induction of light-reaction components in the early stages of PVYNTN infection of tolerant interaction. As some of these components have already been shown to interact with viral proteins, their overproduction might contribute to the absence of symptoms in cv. Désirée.

1 July 2004 in Journal of the American Society for Horticultural Science
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Journal Article
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JDJernej DemšaR
Jernej DemšaR
JOJože Osvald
Jože Osvald
DVDominik Vodnik
Dominik Vodnik
With a high nitrate supply, and most frequently under low-light conditions, lettuce accumulates relatively large amounts of NO3-as a result of an excess of uptake over reduction. Different approaches, which are used to reduce leaf nitrate, often result in a yield loss. A computerized aeroponic system, which supplies different nitrate concentrations in accordance with the changeable light conditions (dynamic light-dependent application of nitrate), was used to reduce nitrate accumulation in lettuce (Lactuca sativa L.) var. Capitata cv. Vanity. Under unfavorable light conditions nitrate was supplied at limited rates (slight, medium, and strong reduction) to the plants. In response to given light conditions the nitrate supply was reduced close to one-half or one-fourth of the full nutrient solution (8 mmol·L-1 NO3-). Controlled nutrition resulted in efficient reduction in leaf nitrate. In the early-spring experiment the average nitrate content in outer leaves was decreased by 9%, 63%, and 92% and in the late-spring experiment the decrease was 23%, 58%, and 76% compared to control. At the same time, the controlled, light-dependent nitrate deprivation did not result in a loss of a lettuce yield (except in the treatment with strong nitrate reduction) and had limited effects on photosynthesis (PN-Ci measurements) and photosynthetic pigments.

6 February 2021 in Plants
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NMNina Kacjan Maršič
Nina Kacjan Maršič
PŠPetra Štolfa
Petra Štolfa
DVDominik Vodnik
Dominik Vodnik
KKKatarina Košmelj
Katarina Košmelj
Maja Mikulic-PetkovsekMaja Mikulic-Petkovsek
Maja Mikulic-Petkovsek
HŠHelena Šircelj
Helena Šircelj
The response of grafted bell pepper plants (Capsicum annuum L. var. grossum (L.) Sendtn.) to salt stress was investigated by analyzing the photosynthetic traits and mineral content of the plants and the metabolic composition of the fruit. The bell pepper variety “Vedrana” was grafted onto the salt-tolerant rootstock “Rocal F1” and grown at two salinities (20 mM and 40 mM NaCl) and control (0 mM NaCl) during the spring–summer period. On a physiological level, similar stomatal restriction of photosynthesis in grafted and ungrafted plants indicated that grafting did not alleviate water balance disturbances under increased salt exposure. Measurements of midday water potential did not show improved water status of grafted plants. The similar metabolic changes in grafted and ungrafted plants were also reflected in similarly reduced fruit yields. Thus, this grafting did not reduce the risk of ionic and osmotic imbalance in pepper plants grown under moderate salt treatment. Changes in the biochemical profiles of the pepper fruit were seen for both added-salt treatments. The fruit phenolic compounds were affected by rootstock mediation, although only for the July harvest, where total phenolics content increased with 40 mM NaCl treatment. Fruit ascorbic acid content increased with the duration of salt stress, without the mediation of the rootstock. The high salt dependence of this quality trait in pepper fruit appears to lead to more limited rootstock mediation effects.

31 January 2009 in Environmental and Experimental Botany
Verified
Journal Article
Closed access
DVDominik Vodnik
Dominik Vodnik
PSP. Strajnar
P. Strajnar
SJS. Jemc
S. Jemc
IMI. Maček
I. Maček

5 January 2023 in Agronomy
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Journal Article
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EPEva Praprotnik
Eva Praprotnik
AVAndrej Vončina
Andrej Vončina
PŽPrimož Žigon
Primož Žigon
MKMatej Knapic
Matej Knapic
NSNik Susič
Nik Susič
JRJaka Razinger
Jaka Razinger
The objective of our research was to test hyperspectral imaging as a method for early detection and discrimination of biotic and abiotic stress in maize. We investigated the individual and combined effects of wireworm feeding and drought stress on leaf spectral responses and on various morphological and physiological traits of maize plants, selecting two hybrids with different tolerance to drought. Physiological parameters were determined at three time points (14, 21 and 28 days after adding wireworms and changing watering regime), along with hyperspectral imaging. Most of the differences in physiological characteristics between treatments were detected on day 21, when drought was the main cause of the negative physiological outcome, while the presence of wireworms only caused lower relative chlorophyll content, resulting in lower combined stress damage in some treatments. The morphological data showed greater wireworm damage to hybrid ZP341 and a greater negative effect of combined stress on hybrid FuturiXX. Hyperspectral imaging detected pest infestation and drought stress before they were detected by classical methods, with the highest overall accuracy on day 14 (84.7%) and the lowest on day 28 (67%). It can therefore be used as a method for early detection of wireworm infestation and/or drought in maize.