Chongli Yuan

Dr. Chongli Yuan

1. Davidson School of Chemical Engineering, Purdue University, IN 47906, USA
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Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2017 in Metallomics
Verified
Journal Article
Open access
PDF file
OSOscar Sánchez
Oscar Sánchez
JLJinyoung Lee
Jinyoung Lee
NHNathaphon Yu King Hing
Nathaphon Yu King Hing
SKSeong-Eun Kim
Seong-Eun Kim
Jennifer FreemanJennifer Freeman
Jennifer Freeman
CYChongli Yuan
Chongli Yuan
Low-dose exposure to lead (Pb) is connected to developmental neurological alterations by inducing molecular changes, such as aberrant gene expression

2 July 2013 in Scientific Reports
Verified
Journal Article
Open access
PDF file
IJIsabel Jimenez-Useche
Isabel Jimenez-Useche
JKJiaying Ke
Jiaying Ke
YTYuqing Tian
Yuqing Tian
DSDaphne Shim
Daphne Shim
SHSteven C. Howell
Steven C. Howell
CYChongli Yuan
Chongli Yuan
A strong correlation between nucleosome positioning and DNA methylation patterns has been reported in literature. However, the mechanistic model accounting for the correlation remains elusive. In this study, we evaluated the effects of specific DNA methylation patterns on modulating nucleosome conformation and stability using FRET and SAXS. CpG dinucleotide repeats at 10 bp intervals were found to play different roles in nucleosome stability dependent on their methylation states and their relative nucleosomal locations. An additional (CpG)5 stretch located in the nucleosomal central dyad does not alter the nucleosome conformation, but significant conformational differences were observed between the unmethylated and methylated nucleosomes. These findings suggest that the correlation between nucleosome positioning and DNA methylation patterns can arise from the variations in nucleosome stability dependent on their sequence and epigenetic content. This knowledge will help to reveal the detailed role of DNA methylation in regulating chromatin packaging and gene transcription.

1 November 2017 in Food and Chemical Toxicology
Verified
Journal Article
Closed access
SWSara E. Wirbisky-Hershberger
Sara E. Wirbisky-Hershberger
OSOscar F. Sanchez
Oscar F. Sanchez
KHKatharine A. Horzmann
Katharine A. Horzmann
DTDevang Thanki
Devang Thanki
CYChongli Yuan
Chongli Yuan
Jennifer FreemanJennifer Freeman
Jennifer Freeman

1 March 2013 in Biophysical Journal
Verified
Journal Article
Closed access
NNNathan P. Nurse
Nathan P. Nurse
IJIsabel Jimenez-Useche
Isabel Jimenez-Useche
ISIan Tad Smith
Ian Tad Smith
CYChongli Yuan
Chongli Yuan

1 December 2012 in Biophysical Journal
Verified
Journal Article
Closed access
IJIsabel Jimenez-Useche
Isabel Jimenez-Useche
CYChongli Yuan
Chongli Yuan

26 July 2024 in Environment International
Verified
Journal Article
Open access
SWShichen Wu
Shichen Wu
JXJunkai Xie
Junkai Xie
HZhan zhao
han zhao
XZXihui Zhao
Xihui Zhao
OSOscar Sánchez
Oscar Sánchez
CYChongli Yuan
Chongli Yuan
PFOA is a legacy Per- and Polyfluorinated Substances (PFAS), a group of chemicals widely used in various industrial applications and consumer products. Although there has been a voluntary phase out of PFOA since 2005, it is still widely detected in various water supplies. A growing body of evidence suggests an association between PFOA exposure, particularly during developmental stages, with increased risks of neurodegenerative diseases (NDs). The neurotoxic mechanism of developmental PFOA exposure, however, remains poorly understood. Utilizing human induced-pluripotent stem cell (hiPSC)-derived cortical neurons, we investigated the effect of PFOA exposure prior to differentiation and assessed changes in neuronal characteristics, transcriptome, and neurodegeneration markers mimicking a Developmental Origin of Health and Disease (DoHAD) paradigm. Exposure to PFOA before neuron differentiation resulted in persistent alterations in nuclear morphology, neuronal network, and calcium activity. RNA sequencing analysis further revealed transcriptomic changes aligning with Alzheimer's Disease (AD) after PFOA exposure. These observations were further corroborated by alterations in tau phosphorylation markers, the presence of fibrillar tau, an increase in liquid droplets, and a decrease in RNA translational efficiency characterized using a battery of biochemical assays. Taken together, our results revealed persistent deficits of key neuronal characteristics induced by pre-differentiation PFOA exposure, suggesting impairments in several AD-related pathways that can together contribute to the elevation of AD risk after pre-differentiation PFOA exposure.