Fernando Gonzalez-Nilo

Dr. Fernando Gonzalez-Nilo

orcid

Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 June 2007 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
SBSebastian E. Brauchi
Sebastian E. Brauchi
GOGerardo Orta
Gerardo Orta
CMCarolina Mascayano
Carolina Mascayano
MSMarcelo Salazar
Marcelo Salazar
NRNatalia Raddatz
Natalia Raddatz
RLRamon Latorre
Ramon Latorre
Phosphatidylinositol 4,5-bisphosphate (PIP 2 ) plays a central role in the activation of several transient receptor potential (TRP) channels. The role of PIP 2 on temperature gating of thermoTRP channels has not been explored in detail, and the process of temperature activation is largely unexplained. In this work, we have exchanged different segments of the C-terminal region between cold-sensitive (TRPM8) and heat-sensitive (TRPV1) channels, trying to understand the role of the segment in PIP 2 and temperature activation. A chimera in which the proximal part of the C-terminal of TRPV1 replaces an equivalent section of TRPM8 C-terminal is activated by PIP 2 and confers the phenotype of heat activation. PIP 2 , but not temperature sensitivity, disappears when positively charged residues contained in the exchanged region are neutralized. Shortening the exchanged segment to a length of 11 aa produces voltage-dependent and temperature-insensitive channels. Our findings suggest the existence of different activation domains for temperature, PIP 2 , and voltage. We provide an interpretation for channel–PIP 2 interaction using a full-atom molecular model of TRPV1 and PIP 2 docking analysis.

3 January 2017 in Journal of Nanobiotechnology
Verified
Journal Article
Open access
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JPJuan P. Peñaloza
Juan P. Peñaloza
VMValeria Márquez-Miranda
Valeria Márquez-Miranda
MCMauricio Cabaña-Brunod
Mauricio Cabaña-Brunod
RRRodrigo Reyes-Ramírez
Rodrigo Reyes-Ramírez
FLFelipe Marchant Llancalahuen
Felipe Marchant Llancalahuen
Carolina OteroCarolina Otero
Carolina Otero
Nanotechnology is a science that involves imaging, measurement, modeling and a manipulation of matter at the nanometric scale. One application of this technology is drug delivery systems based on nanoparticles obtained from natural or synthetic sources. An example of these systems is synthetized from poly(3-hydroxybutyrate-co-3-hydroxyvalerate), which is a biodegradable, biocompatible and a low production cost polymer. The aim of this work was to investigate the uptake mechanism of PHBV nanoparticles in two different epithelial cell lines (HeLa and SKOV-3). As a first step, we characterized size, shape and surface charge of nanoparticles using dynamic light scattering and transmission electron microscopy. Intracellular incorporation was evaluated through flow cytometry and fluorescence microscopy using intracellular markers. We concluded that cellular uptake mechanism is carried out in a time, concentration and energy dependent way. Our results showed that nanoparticle uptake displays a cell-specific pattern, since we have observed different colocalization in two different cell lines. In HeLa (Cervical cancer cells) this process may occur via classical endocytosis pathway and some internalization via caveolin-dependent was also observed, whereas in SKOV-3 (Ovarian cancer cells) these patterns were not observed. Rearrangement of actin filaments showed differential nanoparticle internalization patterns for HeLa and SKOV-3. Additionally, final fate of nanoparticles was also determined, showing that in both cell lines, nanoparticles ended up in lysosomes but at different times, where they are finally degraded, thereby releasing their contents. Our results, provide novel insight about PHBV nanoparticles internalization suggesting that for develop a proper drug delivery system is critical understand the uptake mechanism.

1 May 2013 in Biomaterials
Verified
Journal Article
Closed access
CVCristian Vilos
Cristian Vilos
FMFrancisco A. Morales
Francisco A. Morales
PSPaula A. Solar
Paula A. Solar
NHNatalia S. Herrera
Natalia S. Herrera
FGFernando Gonzalez-Nilo
Fernando Gonzalez-Nilo
LVLuis Velasquez
Luis Velasquez

22 May 2013 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
AVAriela Vergara
Ariela Vergara
JCJeffrey Comer
Jeffrey Comer
LMLuis Monsalve
Luis Monsalve
FGFernando Gonzalez-Nilo
Fernando Gonzalez-Nilo
CSClaudia Sandoval
Claudia Sandoval

9 January 2007 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
MNMaría Isabel Niemeyer
María Isabel Niemeyer
FGFernando Gonzalez-Nilo
Fernando Gonzalez-Nilo
LZLeandro Zúñiga
Leandro Zúñiga
WGWendy González
Wendy González
LCL. Pablo Cid
L. Pablo Cid
FSFrancisco V. Sepúlveda
Francisco V. Sepúlveda
Potassium channels share a common selectivity filter that determines the conduction characteristics of the pore. Diversity in K + channels is given by how they are gated open. TASK-2, TALK-1, and TALK-2 are two-pore region (2P) KCNK K + channels gated open by extracellular alkalinization. We have explored the mechanism for this alkalinization-dependent gating using molecular simulation and site-directed mutagenesis followed by functional assay. We show that the side chain of a single arginine residue (R224) near the pore senses pH in TASK-2 with an unusual pK a of 8.0, a shift likely due to its hydrophobic environment. R224 would block the channel through an electrostatic effect on the pore, a situation relieved by its deprotonation by alkalinization. A lysine residue in TALK-2 fulfills the same role but with a largely unchanged pK a , which correlates with an environment that stabilizes its positive charge. In addition to suggesting unified alkaline pH-gating mechanisms within the TALK subfamily of channels, our results illustrate in a physiological context the principle that hydrophobic environment can drastically modulate the pK a of charged amino acids within a protein.

7 August 2017 in Microbial Cell Factories
Verified
Journal Article
Open access
PDF file
Patricio Muñoz TorresPatricio Muñoz Torres
Patricio Muñoz Torres
SMSebastián L. Márquez
Sebastián L. Márquez
FGFernando Gonzalez-Nilo
Fernando Gonzalez-Nilo
VMValeria Márquez-Miranda
Valeria Márquez-Miranda
JBJenny M. Blamey
Jenny M. Blamey
Antifreeze proteins (AFPs) production is a survival strategy of psychrophiles in ice. These proteins have potential in frozen food industry avoiding the damage in the structure of animal or vegetal foods. Moreover, there is not much information regarding the interaction of Antarctic bacterial AFPs with ice, and new determinations are needed to understand the behaviour of these proteins at the water/ice interface. Different Antarctic places were screened for antifreeze activity and microorganisms were selected for the presence of thermal hysteresis in their crude extracts. Isolates GU1.7.1, GU3.1.1, and AFP5.1 showed higher thermal hysteresis and were characterized using a polyphasic approach. Studies using cucumber and zucchini samples showed cellular protection when samples were treated with partially purified AFPs or a commercial AFP as was determined using toluidine blue O and neutral red staining. Additionally, genome analysis of these isolates revealed the presence of genes that encode for putative AFPs. Deduced amino acids sequences from GU3.1.1 (gu3A and gu3B) and AFP5.1 (afp5A) showed high similarity to reported AFPs which crystal structures are solved, allowing then generating homology models. Modelled proteins showed a triangular prism form similar to β-helix AFPs with a linear distribution of threonine residues at one side of the prism that could correspond to the putative ice binding side. The statistically best models were used to build a protein-water system. Molecular dynamics simulations were then performed to compare the antifreezing behaviour of these AFPs at the ice/water interface. Docking and molecular dynamics simulations revealed that gu3B could have the most efficient antifreezing behavior, but gu3A could have a higher affinity for ice. AFPs from Antarctic microorganisms GU1.7.1, GU3.1.1 and AFP5.1 protect cellular structures of frozen food showing a potential for frozen food industry. Modeled proteins possess a β-helix structure, and molecular docking analysis revealed the AFP gu3B could be the most efficient AFPs in order to avoid the formation of ice crystals, even when gu3A has a higher affinity for ice. By determining the interaction of AFPs at the ice/water interface, it will be possible to understand the process of adaptation of psychrophilic bacteria to Antarctic ice.