Ofir Schuster

Dr. Ofir Schuster

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 January 2021 in Toxins
Verified
Journal Article
Open access
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LFLiron Feldberg
Liron Feldberg
EEeytan elhanany
eytan elhanany
O(Orly Laskar (Levy)
Orly Laskar (Levy)
OSOfir Schuster
Ofir Schuster
Ricin, a protein derived from the seeds of the castor bean plant (Ricinus communis), is a highly lethal toxin that inhibits protein synthesis, resulting in cell death. The widespread availability of ricin, its ease of extraction and its extreme toxicity make it an ideal agent for bioterrorism and self-poisoning. Thus, a rapid, sensitive and reliable method for ricin identification in clinical samples is required for applying appropriate and timely medical intervention. However, this goal is challenging due to the low predicted toxin concentrations in bio-fluids, accompanied by significantly high matrix interferences. Here we report the applicability of a sensitive, selective, rapid, simple and antibody-independent assay for the identification of ricin in body fluids using mass spectrometry (MS). The assay involves lectin affinity capturing of ricin by easy-to-use commercial lactose–agarose (LA) beads, following by tryptic digestion and selected marker identification using targeted LC–MS/MS (Multiple Reaction Monitoring) analysis. This enables ricin identification down to 5 ng/mL in serum samples in 2.5 h. To validate the assay, twenty-four diverse naive- or ricin-spiked serum samples were evaluated, and both precision and accuracy were determined. A real-life test of the assay was successfully executed in a challenging clinical scenario, where the toxin was identified in an abdominal fluid sample taken 72 h post self-injection of castor beans extraction in an eventual suicide case. This demonstrates both the high sensitivity of this assay and the extended identification time window, compared to similar events that were previously documented. This method developed for ricin identification in clinical samples has the potential to be applied to the identification of other lectin toxins.

26 January 2021 in ACS Omega
Verified
Journal Article
Closed access
OSOfir Schuster
Ofir Schuster
AZAnat Zvi
Anat Zvi
OROsnat Rosen
Osnat Rosen
HAHagit Achdout
Hagit Achdout
ABAmir Ben-Shmuel
Amir Ben-Shmuel
LFLiron Feldberg
Liron Feldberg

18 August 2022 in Viruses
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Journal Article
Open access
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OIOfir Israeli
Ofir Israeli
YGYehoudit Guedj-Dana
Yehoudit Guedj-Dana
OSOhad Shifman
Ohad Shifman
SLShirley Lazar
Shirley Lazar
IGInbar Cohen Gihon
Inbar Cohen Gihon
ABAdi Beth-Din
Adi Beth-Din
As of July 2022, more than 16,000 laboratory-confirmed monkeypox (MPX) cases have been reported worldwide. Until recently, MPX was a rare viral disease seldom detected outside Africa. MPX virus (MPXV) belongs to the Orthopoxvirus (OPV) genus and is a genetically close relative of the Variola virus (the causative agent of smallpox). Following the eradication of smallpox, there was a significant decrease in smallpox-related morbidity and the population’s immunity to other OPV-related diseases such as MPX. In parallel, there was a need for differential diagnosis between the different OPVs’ clinical manifestations and diseases with similar symptoms (i.e., chickenpox, herpes simplex). The current study aimed to provide a rapid genetic-based diagnostic tool for accurate and specific identification of MPXV and additional related vesicle-forming pathogens. We initially assembled a list of 14 relevant viral pathogens, causing infectious diseases associated with vesicles, prone to be misdiagnosed as MPX. Next, we developed an approach that we termed rapid amplicon nanopore sequencing (RANS). The RANS approach uses diagnostic regions that harbor high homology in their boundaries and internal diagnostic SNPs that, when sequenced, aid the discrimination of each pathogen within a group. During a multiplex PCR amplification, a dA tail and a 5′-phosphonate were simultaneously added, thus making the PCR product ligation ready for nanopore sequencing. Following rapid sequencing (a few minutes), the reads were compared to a reference database and the nearest strain was identified. We first tested our approach using samples of known viruses cultured in cell lines. All the samples were identified correctly and swiftly. Next, we examined a variety of clinical samples from the 2022 MPX outbreak. Our RANS approach identified correctly all the PCR-positive MPXV samples and mapped them to strains that were sequenced during the 2022 outbreak. For the subset of samples that were negative for MPXV by PCR, we obtained definite results, identifying other vesicle-forming viruses: Human herpesvirus 3, Human herpesvirus 2, and Molluscum contagiosum virus. This work was a proof-of-concept study, demonstrating the potential of the RANS approach for rapid and discriminatory identification of a panel of closely related pathogens. The simplicity and affordability of our approach makes it straightforward to implement in any genetics lab. Moreover, other differential diagnostics panels might benefit from the implementation of the RANS approach into their diagnostics pipelines.

22 March 2019 in Toxins
Verified
Journal Article
Open access
PDF file
EMEfi Makdasi
Efi Makdasi
O(Orly Laskar (Levy)
Orly Laskar (Levy)
EMElad Milrot
Elad Milrot
OSOfir Schuster
Ofir Schuster
SSShlomo Shmaya
Shlomo Shmaya
SYShmuel Yitzhaki
Shmuel Yitzhaki
Ricin and abrin are ribosome-inactivating proteins leading to inhibition of protein synthesis and cell death. These toxins are considered some of the most potent and lethal toxins against which there is no available antidote. Digital holographic microscopy (DHM) is a time-lapse, label-free, and noninvasive imaging technique that can provide phase information on morphological features of cells. In this study, we employed DHM to evaluate the morphological changes of cell lines during ricin and abrin intoxication. We showed that the effect of these toxins is characterized by a decrease in cell confluence and changes in morphological parameters such as cell area, perimeter, irregularity, and roughness. In addition, changes in optical parameters such as phase-shift, optical thickness, and effective-calculated volume were observed. These effects were completely inhibited by specific neutralizing antibodies. An enhanced intoxication effect was observed for preadherent compared to adherent cells, as was detected in early morphology changes and confirmed by annexin V/propidium iodide (PI) apoptosis assay. Detection of the dynamic changes in cell morphology at initial stages of cell intoxication by DHM emphasizes the highly sensitive and rapid nature of this method, allowing the early detection of active toxins.

4 January 2022 in Analytical and Bioanalytical Chemistry
Verified
Journal Article
Closed access
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OSOfir Schuster
Ofir Schuster
YAYafit Atiya-Nasagi
Yafit Atiya-Nasagi
OROsnat Rosen
Osnat Rosen
AZAnat Zvi
Anat Zvi
IGItai Glinert
Itai Glinert
LFLiron Feldberg
Liron Feldberg

28 November 2019 in Journal of Mass Spectrometry
Verified
Journal Article
Closed access
PDF file
LFLiron Feldberg
Liron Feldberg
OSOfir Schuster
Ofir Schuster
EEEytan Elhanany
Eytan Elhanany
OLOrly Laskar
Orly Laskar
SYShmuel Yitzhaki
Shmuel Yitzhaki
SGSigalit Gura
Sigalit Gura