Zuzana  Benková

Dr. Zuzana Benková

Polymer Institute, Slovak Academy of Sciences, Dúbravská cesta 9, 845 41 Bratislava, Slovakia
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Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 December 2004 in Journal of Computational Chemistry
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Journal Article
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ZZuzana Benková
Zuzana Benková
ASAndrzej J. Sadlej
Andrzej J. Sadlej
RORoma E. Oakes
Roma E. Oakes
SBSteven E. J. Bell
Steven E. J. Bell

23 January 2009 in The Journal of Physical Chemistry B
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Journal Article
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PCPeter Cifra
Peter Cifra
ZZuzana Benková
Zuzana Benková
TBTomáš Bleha
Tomáš Bleha

15 January 2008 in The Journal of Physical Chemistry B
Verified
Journal Article
Closed access
PCPeter Cifra
Peter Cifra
ZZuzana Benková
Zuzana Benková
TBTomáš Bleha
Tomáš Bleha


23 April 2005 in Theoretical Chemistry Accounts
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Journal Article
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ZZuzana Benková
Zuzana Benková
ASAndrzej J. Sadlej
Andrzej J. Sadlej
RORoma E. Oakes
Roma E. Oakes
SBSteven E. J. Bell
Steven E. J. Bell

30 June 2010 in Physical Chemistry Chemical Physics
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Journal Article
Closed access
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PCPeter Cifra
Peter Cifra
ZZuzana Benková
Zuzana Benková
TBTomáš Bleha
Tomáš Bleha

The influence of confinement on the persistence length of dsDNA molecules under a high ionic strength environment was explored by coarse-grained Monte Carlo simulations in channels of different profiles. It was found that under confinement three definitions of the persistence length of DNA molecules were not equivalent and represented different properties. In case of the global quantities, the projection and the WLC persistence lengths, the apparent values up to several hundred nanometres are observed for DNA confined in narrow channels. The orientational correlation function 〈cos θ(s)〉 of confined DNA shows a complex pattern, distinctive for semiflexible polymers. At weak and moderate confinements the function 〈cos θ(s)〉 suggests an unexpected increase in the apparent DNA flexibility. The orientational persistence length computed from the initial slope of the function 〈cos θ(s)〉 mirrors only short-scale correlations and gives the value close to the intrinsic persistence length of DNA. The simulation data of direct relevance to experimental studies of DNA in microfluidic devices are compared with analytical theories for stiff chains.