Jibiao Fan

Dr. Jibiao Fan

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Journal Article
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Jibiao FanJibiao Fan
Jibiao Fan
YXYan Xie
Yan Xie
ZZZaichao Zhang
Zaichao Zhang
Liang ChenLiang Chen
Liang Chen
Melatonin (N-acetyl-5-methoxy-tryptamine) is a universal molecule that is present in animals and plants. It has been detected in different kinds of plants and organs in different levels. Melatonin in plants shares the same initial biosynthesis compound with auxin, and therefore functions as indole-3-acetic acid like hormones. Moreover, melatonin is involved in regulating plant growth and development, protecting plants against biotic and abiotic stresses, such as salt, drought, cold, heat and heavy metal stresses. Melatonin improves the stress tolerance of plants via a direct pathway, which scavenges reactive oxygen species directly, and indirect pathways, such as increasing antioxidate enzymes activity, photosynthetic efficiency and metabolites content. In addition, melatonin plays a role in regulating gene expression, and hence affects performance of plants. In this review, the biosynthesis pathway, growth and development regulation, and the environment stress response of melatonin in plants are summarized and future research directions and priorities of melatonin in plants are speculated.

6 April 2020 in Agronomy
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Jibiao FanJibiao Fan
Jibiao Fan
WZWeihong Zhang
Weihong Zhang
EAErick Amombo
Erick Amombo
Longxing HuLongxing Hu
Longxing Hu
JKJohan Olav Kjorven
Johan Olav Kjorven
Liang ChenLiang Chen
Liang Chen
Turfgrasses constitute a vital part of the landscape ecological systems for sports fields, golf courses, home lawns and parks. However, turfgrass species are affected by numerous abiotic stresses include salinity, heat, cold, drought, waterlogging and heavy metals and biotic stresses such as diseases and pests. Harsh environmental conditions may result in growth inhibition, damage in cell structure and metabolic dysfunction. Hence, to survive the capricious environment, turfgrass species have evolved various adaptive strategies. For example, they can expel phytotoxic matters; increase activities of stress response related enzymes and regulate expression of the genes. Simultaneously, some phytohormones and signal molecules can be exploited to improve the stress tolerance in turfgrass. Generally, the mechanisms of the adaptive strategies are integrated but not necessarily the same. Recently, metabolomic, proteomic and transcriptomic analyses have revealed plenty of stress response related metabolites, proteins and genes in turfgrass. Therefore, the regulation mechanism of turfgrass’s response to abiotic and biotic stresses was further understood. However, the specific or broad-spectrum related genes that may improve stress tolerance remain to be further identified. Understanding stress response in turfgrass species will contribute to improve stress tolerance of turfgrass.

3 March 2025 in Molecular Cancer
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XXXintian Xu
Xintian Xu
JSJimeng Su
Jimeng Su
RZRongyi Zhu
Rongyi Zhu
KLKailong Li
Kailong Li
XZXiaolu Zhao
Xiaolu Zhao
FMFengbiao Mao
Fengbiao Mao
High-resolution three-dimensional (3D) tissue analysis has emerged as a transformative innovation in the life sciences, providing detailed insights into the spatial organization and molecular composition of biological tissues. This review begins by tracing the historical milestones that have shaped the development of high-resolution 3D histology, highlighting key breakthroughs that have facilitated the advancement of current technologies. We then systematically categorize the various families of high-resolution 3D histology techniques, discussing their core principles, capabilities, and inherent limitations. These 3D histology techniques include microscopy imaging, tomographic approaches, single-cell and spatial omics, computational methods and 3D tissue reconstruction (e.g. 3D cultures and spheroids). Additionally, we explore a wide range of applications for single-cell 3D histology, demonstrating how single-cell and spatial technologies are being utilized in the fields such as oncology, cardiology, neuroscience, immunology, developmental biology and regenerative medicine. Despite the remarkable progress made in recent years, the field still faces significant challenges, including high barriers to entry, issues with data robustness, ambiguous best practices for experimental design, and a lack of standardization across methodologies. This review offers a thorough analysis of these challenges and presents recommendations to surmount them, with the overarching goal of nurturing ongoing innovation and broader integration of cellular 3D tissue analysis in both biology research and clinical practice.

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LGLu Gan
Lu Gan
MCMing-Hui Chen
Ming-Hui Chen
JZJingxue Zhang
Jingxue Zhang
Jibiao FanJibiao Fan
Jibiao Fan
XYXuebing Yan
Xuebing Yan
Bermudagrass (Cynodon spp.) is one of the most widely distributed warm-season grasses globally. The growth habits and plant type of bermudagrass are strongly associated with the applied purpose of the landscape, livestock, and eco-remediation. Therefore, persistent efforts are made to investigate the genetic basis of plant type and growth habits of bermudagrass. Here, we dissect the genetic diversity of 91 wild bermudagrass resources by genome-wide association studies (GWAS) combined with weighted gene co-expression analysis (WGCNA). This work is based on the RNA-seq data and the genome of African bermudagrass (Cynodon transvaalensis Burtt Davy). Sixteen reliable single-nucleotide polymorphisms (SNPs) in transcribed regions were identified to be associated with the plant height and IAA content in diverse bermudagrass by GWAS. The integration of the results from WGCNA indicates that beta-glucosidase 31 (CdBGLU31) is a candidate gene underlying a G/A SNP signal. Furthermore, both qRT-PCR and correlation coefficient analyses indicate that CdBGLU31 might play a comprehensive role in plant height and IAA biosynthesis and signal. In addition, we observe lower plant height in Arabidopsis bglu11 mutants (homologs of CdBGLU31). It uncovers the breeding selection history of different plant types from diverse bermudagrass and provides new insights into the molecular function of CdBGLU31 both in plant types and in IAA biosynthetic pathways.

13 September 2019 in Plants
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Jibiao FanJibiao Fan
Jibiao Fan
XJXu Jilei
Xu Jilei
WZWeihong Zhang
Weihong Zhang
MAmaurice amee
maurice amee
DLDalin Liu
Dalin Liu
Liang ChenLiang Chen
Liang Chen
Excess salinity is a major environmental stress that limits growth and development of plants. Improving salt stress tolerance of plants is important in order to enhance land utilization and crop yield. Cold priming has been reported to trigger the protective processes in plants that increase their stress tolerance. Bermudagrass (Cynodon dactylon) is one of the most widely used turfgrass species around the world. However, the effect of cold priming on salt tolerance of bermudagrass is largely unknown. In the present study, wild bermudagrass was pre-treated with 4 °C for 6 h before 150 mM NaCl treatment for one week. The results showed that the cell membrane stability, ion homeostasis and photosynthesis process which are usually negatively affected by salt stress in bermudagrass were alleviated by short-term pre-cold treatment. Additionally, the gene expression profile also corresponded to the change of physiological indexes in bermudagrass. The results suggest that cold priming plays a positive role in improving salt stress tolerance of bermudagrass.

5 January 2023 in Agronomy
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Maryam NoorMaryam Noor
Maryam Noor
Jibiao FanJibiao Fan
Jibiao Fan
JZJing-Xue Zhang
Jing-Xue Zhang
CZChuan-Jie Zhang
Chuan-Jie Zhang
SSShengnan Sun
Shengnan Sun
XYXuebing Yan
Xuebing Yan
Cynodon dactylon (L.) Pers. (commonly known as bermudagrass) is a member of the family Poaceae. It is a C4 grass that can grow annually and perennially with clone reproduction and seed-setting. It is not only used as forage but also as a weed in many crops. It grows along roadsides, in barren lands, irrigated lands, and seacoasts, where soil salinity is a major problem. Although bermudagrass is distributed worldwide, it shows limited growth under saline conditions. Under salt stress, the whole-plant growth is disturbed and the forage quality is compromised morphologically. At the physiological level, shoot development is affected owing to the resultant oxidative stress, although the total rate of photosynthesis is not greatly affected. Biochemical changes include a change in the K+/Na+ ratio; antioxidant enzymes such as superoxide dismutase and peroxide dismutase increase, while catalase activity slows down. The anatomical changes are visible as salt crystals on the leaf surface and salt glands on the mesophyll surface. In this paper, the morphological, physiological, biochemical, and proteomic mechanisms of bermudagrass under salt stress are discussed, drawing a study of several genes such as ECA4, RAN1, MHX1, psbA1, psbB1, psbP, and psbY at the molecular level. Therefore, the current review aims to understand how bermudagrass grows and adapts well under salt conditions.