Daniel Czyz

Dr. Daniel Czyz

Department of Microbiology and Cell Science, University of Florida, Gainesville, FL, USA
orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 October 2019 in Nature
Verified
Journal Article
Closed access
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DZDi Zhang
Di Zhang
ZTZhanyun Tang
Zhanyun Tang
HHHe Huang
He Huang
GZGuolin Zhou
Guolin Zhou
CCChang Cui
Chang Cui
YZYingming Zhao
Yingming Zhao

31 January 2023 in Frontiers in Microbiology
Verified
Journal Article
Open access
ADAutumn S. Dove
Autumn S. Dove
DDDominika I. Dzurny
Dominika I. Dzurny
WDWren R. Dees
Wren R. Dees
NQNan Qin
Nan Qin
CRCarmen C. Nunez Rodriguez
Carmen C. Nunez Rodriguez
Daniel CzyzDaniel Czyz
Daniel Czyz
As the threat of antimicrobial-resistant bacteria compromises the safety and efficacy of modern healthcare practices, the search for effective treatments is more urgent than ever. For centuries, silver (Ag) has been known to have antibacterial properties and, over the past two decades, Ag-based nanoparticles have gained traction as potential antimicrobials. The antibacterial efficacy of Ag varies with structure, size, and concentration. In the present study, we examined Ag nanoparticles (AgNPs) for their antimicrobial activity and safety. We compared different commercially-available AgNPs against gram-negative Escherichia coli, Pseudomonas aeruginosa, Acinetobacter baumannii, and gram-positive Staphylococcus aureus methicillin-resistant and susceptible strains. The most effective formula of AgNPs tested had single-digit (μg/mL) minimum inhibitory concentrations against gram-negative multidrug-resistant clinical bacterial isolates with novel and emerging mechanisms of resistance. The mode of killing was assessed in E. coli and was found to be bactericidal, which is consistent with previous studies using other AgNP formulations. We evaluated cytotoxicity by measuring physiological readouts using the Caenorhabditis elegans model and found that motility was affected, but not the lifespan. Furthermore, we found that at their antibacterial concentrations, AgNPs were non-cytotoxic to any of the mammalian cell lines tested, including macrophages, stem cells, and epithelial cells. More interestingly, our experiments revealed synergy with clinically relevant antibiotics. We found that a non-toxic and non-effective concentration of AgNPs reduced the minimum inhibitory concentrations of aminoglycoside by approximately 22-fold. Because both aminoglycosides and Ag are known to target the bacterial ribosome, we tested whether Ag could also target eukaryotic ribosomes. We measured the rate of mistranslation at bactericidal concentration and found no effect, indicating that AgNPs are not proteotoxic to the host at the tested concentrations. Collectively, our results suggest that AgNPs could have a promising clinical application as a potential stand-alone therapy or antibiotic adjuvants.

1 June 2018 in Cell Reports
Verified
Journal Article
Open access
CRCatherine A. Reardon
Catherine A. Reardon
ALAmulya Lingaraju
Amulya Lingaraju
KSKelly Q. Schoenfelt
Kelly Q. Schoenfelt
GZGuolin Zhou
Guolin Zhou
CCChang Cui
Chang Cui
LBLev Becker
Lev Becker
Type 2 diabetes (T2D) is associated with increased risk for atherosclerosis; however, the mechanisms underlying this relationship are poorly understood. Macrophages, which are activated in T2D and causatively linked to atherogenesis, are an attractive mechanistic link. Here, we use proteomics to show that diet-induced obesity and insulin resistance (obesity/IR) modulate a pro-atherogenic "macrophage-sterol-responsive-network" (MSRN), which, in turn, predisposes macrophages to cholesterol accumulation. We identify IFNγ as the mediator of obesity/IR-induced MSRN dysregulation and increased macrophage cholesterol accumulation and show that obesity/IR primes T cells to increase IFNγ production. Accordingly, myeloid cell-specific deletion of the IFNγ receptor (Ifngr1-/-) restores MSRN proteins, attenuates macrophage cholesterol accumulation and atherogenesis, and uncouples the strong relationship between hyperinsulinemia and aortic root lesion size in hypercholesterolemic Ldlr-/- mice with obesity/IR, but does not affect these parameters in Ldlr-/- mice without obesity/IR. Collectively, our findings identify an IFNγ-macrophage pathway as a mechanistic link between obesity/IR and accelerated atherogenesis.

23 August 2024 in Viruses
Verified
Journal Article
Open access
PDF file
MBMichael J Bucher
Michael J Bucher
Daniel CzyzDaniel Czyz
Daniel Czyz
Prophages can alter their bacterial hosts to prevent other phages from infecting the same cell, a mechanism known as superinfection exclusion (SIE). Such alterations are facilitated by phage interactions with critical bacterial components involved in motility, adhesion, biofilm production, conjugation, antimicrobial resistance, and immune evasion. Therefore, the impact of SIE extends beyond the immediate defense against superinfection, influencing the overall fitness and virulence of the bacteria. Evaluating the interactions between phages and their bacterial targets is critical for leading phage therapy candidates like Pseudomonas aeruginosa, a Gram-negative bacterium responsible for persistent and antibiotic-resistant opportunistic infections. However, comprehensive literature on the mechanisms underlying SIE remains scarce. Here, we provide a compilation of well-characterized and potential mechanisms employed by Pseudomonas phages to establish SIE. We hypothesize that the fitness costs imposed by SIE affect bacterial virulence, highlighting the potential role of this mechanism in the management of bacterial infections.

25 May 2021 in VirusDisease
Verified
Journal Article
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SSSUPRAM Hosuru Subramanya
SUPRAM Hosuru Subramanya
Daniel CzyzDaniel Czyz
Daniel Czyz
Krishna Prasad AcharyaKrishna Prasad Acharya
Krishna Prasad Acharya
HHHilary Humphreys
Hilary Humphreys

6 May 2021 in PLOS Pathogens
Verified
Journal Article
Open access
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AWAlyssa C. Walker
Alyssa C. Walker
RBRohan Bhargava
Rohan Bhargava
AVAlfonso S. Vaziriyan-Sani
Alfonso S. Vaziriyan-Sani
CPChristine Pourciau
Christine Pourciau
EDEmily T. Donahue
Emily T. Donahue
Daniel CzyzDaniel Czyz
Daniel Czyz
Protein conformational diseases are characterized by misfolding and toxic aggregation of metastable proteins, often culminating in neurodegeneration. Enteric bacteria influence the pathogenesis of neurodegenerative diseases; however, the complexity of the human microbiome hinders our understanding of how individual microbes influence these diseases. Disruption of host protein homeostasis, or proteostasis, affects the onset and progression of these diseases. To investigate the effect of bacteria on host proteostasis, we usedCaenorhabditis elegansexpressing tissue-specific polyglutamine reporters that detect changes in the protein folding environment. We found that colonization of theC.elegansgut with enteric bacterial pathogens disrupted proteostasis in the intestine, muscle, neurons, and the gonad, while the presence of bacteria that conditionally synthesize butyrate, a molecule previously shown to be beneficial in neurodegenerative disease models, suppressed aggregation and the associated proteotoxicity. Co-colonization with this butyrogenic strain suppressed bacteria-induced protein aggregation, emphasizing the importance of microbial interaction and its impact on host proteostasis. Further experiments demonstrated that the beneficial effect of butyrate depended on the bacteria that colonized the gut and that this protective effect required SKN-1/Nrf2 and DAF-16/FOXO transcription factors. We also found that bacteria-derived protein aggregates contribute to the observed disruption of host proteostasis. Together, these results reveal the significance of enteric infection and gut dysbiosis on the pathogenesis of protein conformational diseases and demonstrate the potential of using butyrate-producing microbes as a preventative and treatment strategy for neurodegenerative disease.