Nikhil Awatade

Dr. Nikhil Awatade


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 February 2015 in EBioMedicine
Verified
Journal Article
Open access
NANikhil Awatade
Nikhil Awatade
IUInna Uliyakina
Inna Uliyakina
Carlos FarinhaCarlos Farinha
Carlos Farinha
LCLuka Clarke
Luka Clarke
KMKarina Mendes
Karina Mendes
MAMargarida Amaral
Margarida Amaral
The best investigational drug to treat cystic fibrosis (CF) patients with the most common CF-causing mutation (F508del) is VX-809 (lumacaftor) which recently succeeded in Phase III clinical trial in combination with ivacaftor. This corrector rescues F508del-CFTR from its abnormal intracellular localization to the cell surface, a traffic defect shared by all Class II CFTR mutants. Our goal here is to test the efficacy of lumacaftor in other Class II mutants in primary human bronchial epithelial (HBE) cells derived from CF patients. The effect of lumacaftor was investigated in primary HBE cells from non-CF and CF patients with F508del/F508del, A561E/A561E, N1303K/G542X, F508del/G542X and F508del/Y1092X genotypes by measurements of Forskolin plus Genistein-inducible equivalent short-circuit current (Ieq-SC-Fsk + Gen) in perfused open-circuit Ussing chambers. Efficacy of corrector C18 was also assessed on A561E/A561E and F508del/F508del cells. Our data indicate that A561E (when present in both alleles) responds positively to lumacaftor treatment at equivalent efficacy of F508del in primary HBE cells. Similarly, lumacaftor has a positive impact on Y1092X, but not on N1303K. Our data also show that cells with only one copy of F508del-CFTR respond less to VX-809. Moreover, there is great variability in lumacaftor responses among F508del-homozygous cells from different donors. Compound C18 failed to rescue A561E-CFTR but not in F508del-CFTR, thus plausibly it has a different mechanism of action distinct from lumacaftor. CF patients with A561E (and likely also those with Y1029X) can potentially benefit from lumacaftor. Moreover, the methodology used here exemplifies how ex vivo approaches may apply personalized therapies to CF and possibly other respiratory diseases.

Verified
Journal Article
Open access
PDF file
NANikhil Awatade
Nikhil Awatade
PWPeter Wark
Peter Wark
Andrew S. L. ChanAndrew S. L. Chan
Andrew S. L. Chan
SMSM ABDULLAH AL MAMUN
SM ABDULLAH AL MAMUN
NENurul Yaqeen Binti Mohd Esa
Nurul Yaqeen Binti Mohd Esa
OAOn Behalf Of The Asian Pacific Society Of Respirology (Apsr) Copd Assembly
On Behalf Of The Asian Pacific Society Of Respirology (Apsr) Copd Assembly
Chronic obstructive pulmonary disease (COPD) is significant cause of morbidity and mortality worldwide. There is mounting evidence suggesting that COPD patients are at increased risk of severe COVID-19 outcomes; however, it remains unclear whether they are more susceptible to acquiring SARS-CoV-2 infection. In this comprehensive review, we aim to provide an up-to-date perspective of the intricate relationship between COPD and COVID-19. We conducted a thorough review of the literature to examine the evidence regarding the susceptibility of COPD patients to COVID-19 infection and the severity of their disease outcomes. While most studies have found that pre-existing COPD is associated with worse COVID-19 outcomes, some have yielded conflicting results. We also discuss confounding factors such as cigarette smoking, inhaled corticosteroids, and socioeconomic and genetic factors that may influence this association. Furthermore, we review acute COVID-19 management, treatment, rehabilitation, and recovery in COPD patients and how public health measures impact their care. In conclusion, while the association between COPD and COVID-19 is complex and requires further investigation, this review highlights the need for careful management of COPD patients during the pandemic to minimize the risk of severe COVID-19 outcomes.

12 March 2015 in Scientific Reports
Verified
Journal Article
Open access
PDF file
HBHugo M Botelho
Hugo M Botelho
IUInna Uliyakina
Inna Uliyakina
NANikhil Awatade
Nikhil Awatade
MPMaria C. Proença
Maria C. Proença
CTChristian Tischer
Christian Tischer
MAMargarida Amaral
Margarida Amaral
Plasma membrane proteins are essential molecules in the cell which mediate interactions with the exterior milieu, thus representing key drug targets for present pharma. Not surprisingly, protein traffic disorders include a large range of diseases sharing the common mechanism of failure in the respective protein to reach the plasma membrane. However, specific therapies for these diseases are remarkably lacking. Herein, we report a robust platform for drug discovery applied to a paradigmatic genetic disorder affecting intracellular trafficking – Cystic Fibrosis. This platform includes (i) two original respiratory epithelial cellular models incorporating an inducible double-tagged traffic reporter; (ii) a plasma membrane protein traffic assay for high-throughput microscopy screening; and (iii) open-source image analysis software to quantify plasma membrane protein traffic. By allowing direct scoring of compounds rescuing the basic traffic defect, this platform enables an effective drug development pipeline, which can be promptly adapted to any traffic disorder-associated protein and leverage therapy development efforts.

1 March 2019 in Journal of Cystic Fibrosis
Verified
Journal Article
Closed access
NANikhil Awatade
Nikhil Awatade
SRSofia Ramalho
Sofia Ramalho
ISIris Silva
Iris Silva
VFVerónica Felício
Verónica Felício
HBHugo M Botelho
Hugo M Botelho
MAMargarida Amaral
Margarida Amaral

14 October 2015 in RSC Advances
Verified
Journal Article
Closed access
PDF file
JSJitendra Kumar Srivastava
Jitendra Kumar Srivastava
NANikhil Awatade
Nikhil Awatade
HBHans Raj Bhat
Hans Raj Bhat
AKArthur Kmit
Arthur Kmit
KMKarina Mendes
Karina Mendes
USUdaya Pratap Singh
Udaya Pratap Singh
Cystic fibrosis (CF) is a monogenetic disease caused mostly by the F508del mutation, a deletion of phenylalanine at position 508 of the CF transmembrane conductance regulator (CFTR) protein, which causes improper localization and functioning of this chloride channel in lung, pancreas, and intestine by affecting the normal fluid homeostasis. In CF the lungs are the most affected organ due to the accumulation of thick mucus, which results into heavy bacterial load and associated chronic inflammation. Therefore, novel state-of-the-art therapies are needed to circumvent this problem. To address this, a series of compounds (thiazolidin-4-one-1,3,5-triazines) was tested for the inhibition of NF-κB, and compounds SP6 and SP5 showed most significant activity (respectively with relative NF-κB activity: 1.82 ± 1.87 and 1.96 ± 1.56). Docking studies of the active compounds in the DNA binding surface of the N-terminal domains of NF-κB were also carried out to identify which structural motifs are vital for activity. These compounds were also tested for antibiofilm activity against P. aeruginosa and S. aureus where they showed MIC ranges from 7.81–125 μg mL−1. The most active compound – SP6 was further assayed by micro-Ussing chamber experiments to determine its CFTR inhibitory properties, given its structural similarity to CFTR Inh172. Results suggest that SP6 does not inhibit CFTR alone or in combination with Inh172.

4 May 2016 in Cellular and Molecular Life Sciences
Verified
Journal Article
Closed access
PDF file
JPJoana F. S. Pereira
Joana F. S. Pereira
NANikhil Awatade
Nikhil Awatade
CLCláudia A. Loureiro
Cláudia A. Loureiro
PMPaulo Matos
Paulo Matos
MAMargarida Amaral
Margarida Amaral
Peter JordanPeter Jordan
Peter Jordan