Coronary heart disease is the first killer of human health. At present, the most widely used approach of coronary heart disease diagnosis is coronary angiography, a surgery that could potentially cause some physical damage to the patients, together with some complications and adverse reactions. Furthermore, coronary angiography is expensive thus cannot be widely used in under development country. On the other hand, the heart color Doppler echocardiography report, blood biochemical indicators and personal information, such as gender, age and diabetes, can reflect the degree of heart damage in patients to some extent. This paper proposes a combined reinforcement multitask progressive time-series networks (CRMPTN) model to predict the grade of coronary heart disease through heart color Doppler echocardiography report, blood biochemical indicators and ten basic body information items about the patients. In this model, the first step is to perform deep reinforcement learning (DRL) pre-training through asynchronous advantage actor-critic (A3C). Training data is adopted to optimize the recurrent neural network (RNN) that parameterizes the stochastic policy. In the second step, soft parameter sharing module, hard parameter sharing module and progressive time-series networks are used to predict the status of coronary heart disease. The experimental results show that after DRL pre-training, the multiple tasks in the model interact with each other and learn together to achieve satisfactory results and outperform other state-of-the-art methods.
25 November 2019 in IEEE/ACM Transactions on Computational Biology and Bioinformatics
Breast tumor classification with multiple medical reports such as B-ultrasound, Mammography (X-ray) and Nuclear Magnetic Resonance Imaging (MRI) is crucial to the intelligent cancer diagnosis system. Unlike the other domain texts, the medical reports have latent hierarchical syntactic structures and have hidden rich semantic information about the entities and relationships, which poses a great challenge of breast cancer classification. In this paper, we proposed a Knowledge-powered Deep Breast Tumor Classification model (KDBTC), which takes the semantic information as a kind of prior knowledge and incorporated it into deep neural networks. Specially, our proposed model first uses Hierarchical Attention Bidirectional Recurrent Neural Networks (HA-BiRNNs) to encode the syntax-aware representation of medical reports in a hierarchical way. In the HA-BiRNN, a hierarchical neural network structure, consisting in two encoder layers of BiRNN (Bidirectional Recurrent Neural Networks), mirrors the hierarchical structure of medical reports, and a hierarchical attention mechanism, consisting of two levels attentions, attends to important elements within clinical report with wordlevel attention and sentence-level attention. Secondly, our model obtains the semantic information relevant to the medical reports from the clinical domain semantic tree, and encodes the semantic representation of medical reports by using Tree Structured Recurrent Neural Network with gated recursive units (Tree-GRUs). Finally, we classify breast tumors by combining both the syntax and semantic representations of medical reports. We evaluate our method on the real-world breast cancer medical reports, and results show that our method achieves higher performance on breast cancer classification.
26 October 2017 in Lecture Notes in Computer Science
Objective. Diabetic complications have brought a tremendous burden for diabetic patients, but the problem of predicting diabetic complications is still unresolved. Our aim is to explore the relationship between hemoglobin A1C (HbA1c), insulin (INS), and glucose (GLU) and diabetic complications in combination with individual factors and to effectively predict multiple complications of diabetes. Methods. This was a real-world study. Data were collected from 40,913 participants with an average age of 48 years from the Department of Endocrinology of Ruijin Hospital in Shanghai. We proposed deep personal multitask prediction of diabetes complication with attentive interactions (DPMP-DC) to predict the five complication models of diabetes, including diabetic retinopathy, diabetic nephropathy, diabetic peripheral neuropathy, diabetic foot disease, and diabetic cardiovascular disease. Results. Our model has an accuracy rate of 88.01 for diabetic retinopathy, 89.58 for diabetic nephropathy, 85.77 for diabetic neuropathy, 80.56 for diabetic foot disease, and 82.48 for diabetic cardiovascular disease. The multitasking accuracy of multiple complications is 84.67, and the missed diagnosis rate is 9.07. Conclusion. We put forward the method of interactive integration with individual factors of patients for the first time in diabetic complications, which reflect the differences between individuals. Our multitask model using the hard sharing mechanism provides better prediction than prior single prediction models.