Vladimir Torbeev

Dr. Vladimir Torbeev


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 August 2019 in Angewandte Chemie International Edition
Verified
Journal Article
Open access
PDF file
RVRobrecht M. A. Vergauwe
Robrecht M. A. Vergauwe
ATAnoop Thomas
Anoop Thomas
KNKalaivanan Nagarajan
Kalaivanan Nagarajan
Atef ShalabneyAtef Shalabney
Atef Shalabney
JGJino George
Jino George
TEThomas W. Ebbesen
Thomas W. Ebbesen
Vibrational strong coupling (VSC) has recently emerged as a completely new tool for influencing chemical reactivity. It harnesses electromagnetic vacuum fluctuations through the creation of hybrid states of light and matter, called polaritonic states, in an optical cavity resonant to a molecular absorption band. Here, we investigate the effect of vibrational strong coupling of water on the enzymatic activity of pepsin, where a water molecule is directly involved in the enzyme's chemical mechanism. We observe an approximately 4.5‐fold decrease of the apparent second‐order rate constant kcat/Km when coupling the water stretching vibration, whereas no effect was detected for the strong coupling of the bending vibration. The possibility of modifying enzymatic activity by coupling water demonstrates the potential of VSC as a new tool to study biochemical reactivity.

7 October 2016 in The Journal of Physical Chemistry Letters
Verified
Journal Article
Closed access
RVRobrecht M. A. Vergauwe
Robrecht M. A. Vergauwe
JGJino George
Jino George
TCThibault Chervy
Thibault Chervy
JHJames A. Hutchison
James A. Hutchison
ASAtef Shalabney
Atef Shalabney
TEThomas W. Ebbesen
Thomas W. Ebbesen

1 March 2016 in Journal of Peptide Science
Verified
Journal Article
Closed access
PDF file
VTVladimir Torbeev
Vladimir Torbeev
MGMarcel Grogg
Marcel Grogg
JRJérémy Ruiz
Jérémy Ruiz
RBRégis Boehringer
Régis Boehringer
ASAlicia Schirer
Alicia Schirer
DHDonald Hilvert
Donald Hilvert

26 August 2019 in Angewandte Chemie
Verified
Journal Article
Open access
PDF file
RVRobrecht M. A. Vergauwe
Robrecht M. A. Vergauwe
ATAnoop Thomas
Anoop Thomas
KNKalaivanan Nagarajan
Kalaivanan Nagarajan
Atef ShalabneyAtef Shalabney
Atef Shalabney
JGJino George
Jino George
TEThomas W. Ebbesen
Thomas W. Ebbesen
Vibrational strong coupling (VSC) has recently emerged as a completely new tool for influencing chemical reactivity. It harnesses electromagnetic vacuum fluctuations through the creation of hybrid states of light and matter, called polaritonic states, in an optical cavity resonant to a molecular absorption band. Here, we investigate the effect of vibrational strong coupling of water on the enzymatic activity of pepsin, where a water molecule is directly involved in the enzyme's chemical mechanism. We observe an approximately 4.5‐fold decrease of the apparent second‐order rate constant kcat/Km when coupling the water stretching vibration, whereas no effect was detected for the strong coupling of the bending vibration. The possibility of modifying enzymatic activity by coupling water demonstrates the potential of VSC as a new tool to study biochemical reactivity.

19 May 2021 in The Journal of Physical Chemistry B
Verified
Journal Article
Open access
MGManuela Grelich-Mucha
Manuela Grelich-Mucha
AGAna M. Garcia
Ana M. Garcia
VTVladimir Torbeev
Vladimir Torbeev
KOKatarzyna Ożga
Katarzyna Ożga
ŁBŁukasz Berlicki
Łukasz Berlicki
Joanna Olesiak-BanskaJoanna Olesiak-Banska
Joanna Olesiak-Banska
Amyloid fibrils are peptide or protein aggregates possessing a cross-β-sheet structure. They possess intrinsic fluorescence property, which is still not fully understood. Herein, we compare structural and optical properties of fibrils formed from L- and D-enantiomers of the (105–115) fragment of transthyretin (TTR) and from their racemic mixture. Our results show that autofluorescence of fibrils obtained from enantiomers differs from that of fibrils from the racemic mixture. In order to elucidate the origin of observed differences, we analyzed the structure and morphology of fibrils and showed how variations in β-sheet organization influence optical properties of fibrils. We clarified the contribution of aromatic rings and the amyloid backbone to the final blue-green emission of fibrils. This work demonstrates how enantiomeric composition of amino acids allows us to modulate the self-assembly and final morphology of well-defined fibrillar bionanostructures with optical properties controlled by supramolecular organization.

12 June 2017 in Chemical Communications
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Journal Article
Closed access
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BSBoris Schmidtgall
Boris Schmidtgall
OCOlivier Chaloin
Olivier Chaloin
VBValentin Bauer
Valentin Bauer
MSManuela Sumyk
Manuela Sumyk
CBCatherine Birck
Catherine Birck
VTVladimir Torbeev
Vladimir Torbeev
Non-canonical α-methyl amino acids were incorporated at various sites in the sequence of intrinsically disordered activation domain from the p160 transcriptional co-activator (ACTR) to facilitate the formation of α-helical structures.