Xinping Xiao

Xinping Xiao


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 September 2019 in BMC Bioinformatics
Verified
Journal Article
Open access
PDF file
JWJianghui Wen
Jianghui Wen
YLYeshu Liu
Yeshu Liu
YSYu Shi
Yu Shi
HHHaoran Huang
Haoran Huang
BDBing Deng
Bing Deng
XXXinping Xiao
Xinping Xiao
Background: Long-chain non-coding RNA (lncRNA) is closely related to many biological activities. Since its sequence structure is similar to that of messenger RNA (mRNA), it is difficult to distinguish between the two based only on sequence biometrics. Therefore, it is particularly important to construct a model that can effectively identify lncRNA and mRNA. Results: First, the difference in the k-mer frequency distribution between lncRNA and mRNA sequences is considered in this paper, and they are transformed into the k-mer frequency matrix. Moreover, k-mers with more species are screened by relative entropy. The classification model of the lncRNA and mRNA sequences is then proposed by inputting the k-mer frequency matrix and training the convolutional neural network. Finally, the optimal k-mer combination of the classification model is determined and compared with other machine learning methods in humans, mice and chickens. The results indicate that the proposed model has the highest classification accuracy. Furthermore, the recognition ability of this model is verified to a single sequence. Conclusion: We established a classification model for lncRNA and mRNA based on k-mers and the convolutional neural network. The classification accuracy of the model with 1-mers, 2-mers and 3-mers was the highest, with an accuracy of 0.9872 in humans, 0.8797 in mice and 0.9963 in chickens, which is better than those of the random forest, logistic regression, decision tree and support vector machine.


24 February 2022 in Neural Computing and Applications
Verified
Journal Article
Closed access
PDF file
XLXue Li
Xue Li
XXXinping Xiao
Xinping Xiao
HGHuan Guo
Huan Guo

29 February 2024 in ISA Transactions
Verified
Journal Article
Closed access
RCRongxing Chen
Rongxing Chen
XXXinping Xiao
Xinping Xiao
MGMingyun Gao
Mingyun Gao
QDQi Ding
Qi Ding

15 April 2022 in Environmental Science and Pollution Research
Verified
Journal Article
Closed access
PDF file
SHSiyuan Huang
Siyuan Huang
XXXinping Xiao
Xinping Xiao
HGHuan Guo
Huan Guo

1 January 2019 in Complexity
Verified
Journal Article
Open access
PDF file
段H段辉明 huiming
段辉明 huiming
XXXinping Xiao
Xinping Xiao
Short‐term traffic flow prediction is an important theoretical basis for intelligent transportation systems, and traffic flow data contain abundant multimode features and exhibit characteristic spatiotemporal correlations and dynamics. To predict the traffic flow state, it is necessary to design a model that can adapt to changing traffic flow characteristics. Thus, a dynamic tensor rolling nonhomogeneous discrete grey model (DTRNDGM) is proposed. This model achieves rolling prediction by introducing a cycle truncation accumulated generating operation; furthermore, the proposed model is unbiased, and it can perfectly fit nonhomogeneous exponential sequences. In addition, based on the multimode characteristics of traffic flow data tensors and the relationship between the cycle truncation accumulated generating operation and matrix perturbation to determine the cycle of dynamic prediction, the proposed model compensates for the periodic verification of the RSDGM and SGM grey prediction models. Finally, traffic flow data from the main route of Shaoshan Road, Changsha, Hunan, China, are used as an example. The experimental results show that the simulation and prediction results of DTRNDGM are good.