Petr Bartůněk

Petr Bartůněk

orcid

Research Focus & Metrics

Academic Career Length

39Years (1988-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 November 2019 in Genes
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MHMartina Hason
Martina Hason
PBPetr Bartůněk
Petr Bartůněk
Zebrafish (Danio rerio) is a valuable non-mammalian vertebrate model widely used to study development and disease, including more recently cancer. The evolutionary conservation of cancer-related programs between human and zebrafish is striking and allows extrapolation of research outcomes obtained in fish back to humans. Zebrafish has gained attention as a robust model for cancer research mainly because of its high fecundity, cost-effective maintenance, dynamic visualization of tumor growth in vivo, and the possibility of chemical screening in large numbers of animals at reasonable costs. Novel approaches in modeling tumor growth, such as using transgene electroporation in adult zebrafish, could improve our knowledge about the spatial and temporal control of cancer formation and progression in vivo. Looking at genetic as well as epigenetic alterations could be important to explain the pathogenesis of a disease as complex as cancer. In this review, we highlight classic genetic and transplantation models of cancer in zebrafish as well as provide new insights on advances in cancer modeling. Recent progress in zebrafish xenotransplantation studies and drug screening has shown that zebrafish is a reliable model to study human cancer and could be suitable for evaluating patient-derived xenograft cell invasiveness. Rapid, large-scale evaluation of in vivo drug responses and kinetics in zebrafish could undoubtedly lead to new applications in personalized medicine and combination therapy. For all of the above-mentioned reasons, zebrafish is approaching a future of being a pre-clinical cancer model, alongside the mouse. However, the mouse will continue to be valuable in the last steps of pre-clinical drug screening, mostly because of the highly conserved mammalian genome and biological processes.

5 December 2013 in Blood
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DSDavid L. Stachura
David L. Stachura
OSOndřej Svoboda
Ondřej Svoboda
CCClyde A. Campbell
Clyde A. Campbell
RERaquel Espín-Palazón
Raquel Espín-Palazón
RLRyan P. Lau
Ryan P. Lau
DTDavid Traver
David Traver
Key Points: Two Gcsf ligands function redundantly through the Gcsf receptor to promote myelopoiesis in zebrafish. Gcsf signaling is required for HSPC emergence and expansion in zebrafish.

1 August 2017 in Nature Methods
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Journal Article
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CSCtibor Skuta
Ctibor Skuta
MPMartin Popr
Martin Popr
TMTomas Muller
Tomas Muller
JJJindrich Jindrich
Jindrich Jindrich
MKMichal Kahle
Michal Kahle
PBPetr Bartůněk
Petr Bartůněk

18 August 2015 in Genome Biology
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THTomas Hron
Tomas Hron
PPPetr Pajer
Petr Pajer
JPJan Pačes
Jan Pačes
PBPetr Bartůněk
Petr Bartůněk
Daniel EllederDaniel Elleder
Daniel Elleder
We report that a subset of avian genes is characterized by very high GC content and long G/C stretches. These sequence characteristics correlate with the frequent absence of these genes from genomic databases. We provide several examples where genes in this subset are mistakenly reported as missing in birds.www.dx.doi.org/10.1186/s13059-015-0725-y

1 April 2014 in Molecular Cancer Therapeutics
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LTLucie Tumova
Lucie Tumova
APAntonio Pombinho
Antonio Pombinho
MVMartina Vojtechova
Martina Vojtechova
JSJitka Stancikova
Jitka Stancikova
DGDietmar Gradl
Dietmar Gradl
VKVladimir Korinek
Vladimir Korinek
The Wnt signaling pathway is required during embryonic development and for the maintenance of homeostasis in adult tissues. However, aberrant activation of the pathway is implicated in a number of human disorders, including cancer of the gastrointestinal tract, breast, liver, melanoma, and hematologic malignancies. In this study, we identified monensin, a polyether ionophore antibiotic, as a potent inhibitor of Wnt signaling. The inhibitory effect of monensin on the Wnt/β-catenin signaling cascade was observed in mammalian cells stimulated with Wnt ligands, glycogen synthase kinase-3 inhibitors, and in cells transfected with β-catenin expression constructs. Furthermore, monensin suppressed the Wnt-dependent tail fin regeneration in zebrafish and Wnt- or β-catenin–induced formation of secondary body axis in Xenopus embryos. In Wnt3a-activated HEK293 cells, monensin blocked the phoshorylation of Wnt coreceptor low-density lipoprotein receptor related protein 6 and promoted its degradation. In human colorectal carcinoma cells displaying deregulated Wnt signaling, monensin reduced the intracellular levels of β-catenin. The reduction attenuated the expression of Wnt signaling target genes such as cyclin D1 and SP5 and decreased the cell proliferation rate. In multiple intestinal neoplasia (Min) mice, daily administration of monensin suppressed progression of the intestinal tumors without any sign of toxicity on normal mucosa. Our data suggest monensin as a prospective anticancer drug for therapy of neoplasia with deregulated Wnt signaling. Mol Cancer Ther; 13(4); 812–22. ©2014 AACR.

8 July 2015 in Scientific Reports
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MLMichaela Liegertová
Michaela Liegertová
JPJiří Pergner
Jiří Pergner
IKIryna Kozmiková
Iryna Kozmiková
PFPeter Fabian
Peter Fabian
APAntonio Pombinho
Antonio Pombinho
ZKZbynek Kozmik
Zbynek Kozmik
Animals sense light primarily by an opsin-based photopigment present in a photoreceptor cell. Cnidaria are arguably the most basal phylum containing a well-developed visual system. The evolutionary history of opsins in the animal kingdom has not yet been resolved. Here, we study the evolution of animal opsins by genome-wide analysis of the cubozoan jellyfish Tripedalia cystophora, a cnidarian possessing complex lens-containing eyes and minor photoreceptors. A large number of opsin genes with distinct tissue- and stage-specific expression were identified. Our phylogenetic analysis unequivocally classifies cubozoan opsins as a sister group to c-opsins and documents lineage-specific expansion of the opsin gene repertoire in the cubozoan genome. Functional analyses provided evidence for the use of the Gs-cAMP signaling pathway in a small set of cubozoan opsins, indicating the possibility that the majority of other cubozoan opsins signal via distinct pathways. Additionally, these tests uncovered subtle differences among individual opsins, suggesting possible fine-tuning for specific photoreceptor tasks. Based on phylogenetic, expression and biochemical analysis we propose that rapid lineage- and species-specific duplications of the intron-less opsin genes and their subsequent functional diversification promoted evolution of a large repertoire of both visual and extraocular photoreceptors in cubozoans.