Leonel Malacrida

Dr. Leonel Malacrida

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Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 September 2018 in Nature Protocols
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Journal Article
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Suman RanjitSuman Ranjit
Suman Ranjit
LMLeonel Malacrida
Leonel Malacrida
DJDavid M. Jameson
David M. Jameson
EGEnrico Gratton
Enrico Gratton

23 March 2018 in Cancer Discovery
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Journal Article
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SKSeong M. Kim
Seong M. Kim
TNTricia T. Nguyen
Tricia T. Nguyen
ARArchna Ravi
Archna Ravi
PKPeter Kubiniok
Peter Kubiniok
BFBrendan T. Finicle
Brendan T. Finicle
AEAimee L. Edinger
Aimee L. Edinger
We report that PTEN-deficient prostate cancer cells use macropinocytosis to survive and proliferate under nutrient stress. PTEN loss increased macropinocytosis only in the context of AMPK activation revealing a general requirement for AMPK in macropinocytosis and a novel mechanism by which AMPK promotes survival under stress. In prostate cancer cells, albumin uptake did not require macropinocytosis, but necrotic cell debris proved a specific macropinocytic cargo. Isotopic labeling confirmed that macropinocytosed necrotic cell proteins fueled new protein synthesis in prostate cancer cells. Supplementation with necrotic debris, but not albumin, also maintained lipid stores suggesting that macropinocytosis can supply nutrients other than amino acids. Non-transformed prostatic epithelial cells were not macropinocytic, but patient-derived prostate cancer organoids and xenografts and autochthonous prostate tumors all exhibited constitutive macropinocytosis, and blocking macropinocytosis limited prostate tumor growth. Macropinocytosis of extracellular material by prostate cancer cells is a previously unappreciated tumor-microenvironment interaction that could be targeted therapeutically.

7 November 2024 in Nature Reviews Methods Primers
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Journal Article
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BTBelen Torrado
Belen Torrado
BPBruno Pannunzio
Bruno Pannunzio
LMLeonel Malacrida
Leonel Malacrida
MDMichelle A. Digman
Michelle A. Digman

29 January 2021 in Accounts of Chemical Research
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Journal Article
Closed access
GGGerman Gunther
German Gunther
LMLeonel Malacrida
Leonel Malacrida
DJDavid M. Jameson
David M. Jameson
EGEnrico Gratton
Enrico Gratton
SSSusana A. Sánchez
Susana A. Sánchez

1 June 2016 in Biomedical Optics Express
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Journal Article
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NMNing Ma
Ning Ma
MDMichelle A. Digman
Michelle A. Digman
LMLeonel Malacrida
Leonel Malacrida
EGEnrico Gratton
Enrico Gratton
We propose a graphical method using the phasor representation of the fluorescence decay to derive the absolute concentration of NADH in cells. The method requires the measurement of a solution of NADH at a known concentration. The phasor representation of the fluorescence decay accounts for the differences in quantum yield of the free and bound form of NADH, pixel by pixel of an image. The concentration of NADH in every pixel in a cell is obtained after adding to each pixel in the phasor plot a given amount of unmodulated light which causes a shift of the phasor towards the origin by an amount that depends on the intensity at the pixel and the fluorescence lifetime at the pixel. The absolute concentration of NADH is obtained by comparison of the shift obtained at each pixel of an image with the shift of the calibrated solution.

28 September 2023 in Nature Communications
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AMAgustín Mangiarotti
Agustín Mangiarotti
MSMacarena Siri
Macarena Siri
NTNicky W. Tam
Nicky W. Tam
ZZZiliang Zhao
Ziliang Zhao
LMLeonel Malacrida
Leonel Malacrida
RDRumiana Dimova
Rumiana Dimova
Membrane wetting by biomolecular condensates recently emerged as a key phenomenon in cell biology, playing an important role in a diverse range of processes across different organisms. However, an understanding of the molecular mechanisms behind condensate formation and interaction with lipid membranes is still missing. To study this, we exploited the properties of the dyes ACDAN and LAURDAN as nano-environmental sensors in combination with phasor analysis of hyperspectral and lifetime imaging microscopy. Using glycinin as a model condensate-forming protein and giant vesicles as model membranes, we obtained vital information on the process of condensate formation and membrane wetting. Our results reveal that glycinin condensates display differences in water dynamics when changing the salinity of the medium as a consequence of rearrangements in the secondary structure of the protein. Remarkably, analysis of membrane-condensates interaction with protein as well as polymer condensates indicated a correlation between increased wetting affinity and enhanced lipid packing. This is demonstrated by a decrease in the dipolar relaxation of water across all membrane-condensate systems, suggesting a general mechanism to tune membrane packing by condensate wetting.