The house fly, Musca domestica L. (Diptera: Muscidae), is a global pest of humans and animals that carries scores of pathogens and costs up to $1 billion per year in the United States alone. Information is reviewed on recognition, distribution, biology, dispersal, and associations with microbes. Particular challenges of managing flies in different animal systems are discussed for swine, poultry, dairy cattle, beef feedlot, and equine operations. Effective fly management requires diligent monitoring and integration of cultural control, especially manure management, with mechanical control, traps, conservation or augmentative biological control, and judicious use of insecticides. House fly is notorious for developing insecticide resistance and its resistance status is summarized as of August 2020. Several critical research needs are identified. Monitoring systems and nuisance/action thresholds need improvement. Faster-killing strains and better formulations are needed to integrate pathogens into Integrated Pest management (IPM) programs. The use of parasitoids remains an inexact science with many questions remaining about species selection and release rates. New attractants are needed for use in traps and attract-and-infect/kill strategies. Screening of new active ingredients for toxicity should continue, including a rigorous assessment of essential oils and other botanicals. Rising global temperatures may affect the balance of the fly with natural enemies. An understanding of the fly microbiome may reveal unknown vulnerabilities, and much remains to be learned about how flies acquire, retain, and transmit human and animal pathogens. System-specific research is also needed to tailor fly IPM programs to individual animal systems, especially in organic and free-range animal production.

Larval house flies, Musca domestica (L.), nutritionally require live bacteria; therefore, all stadia are associated with microbe-rich environments. Larvae live among and ingest bacteria, which are digested via the combined activity of digestive enzymes, lysozyme, and antimicrobial effectors. Some bacteria resist digestion and subsequent proteolytic processes that occur during metamorphosis, and are carried trans-stadially. Adult house flies ingest bacteria directly from septic substrates or indirectly via self-grooming. Ingested bacteria also face digestion in adults; nonetheless, some microbes not only survive, but proliferate and exchange genetic material. The interaction between adult flies and bacteria is critical in determining vector potential. If the fly is ineffective at eliminating ingested microbes, they can be disseminated in excreta. Unlike larvae, adult house flies are highly mobile, synanthropic, and gregarious, moving indiscriminately between septic environments and domestic locations. Flies can travel miles between sites, dispersing pathogens and their antibiotic-resistance and virulence genes. Considered together, these aspects of adult fly biology underlie their role in the epidemiology and ecology of infectious diseases. Studies of house fly biology have fortuitously revealed interesting adaptations to their septic lifestyle that can be exploited in future approaches to fly control and human health. Larval dependence on microbes can be integrated in novel control strategies, which alter habitat microflora. In contrast, larvae can be utilized beneficially to clear manure of pathogens before being used as fertilizer. In addition, house fly defense effectors such as antimicrobial peptides serve as an untapped resource with the potential to generate novel classes of microbicidal therapeutics.

House flies are well recognized as filth-associated organisms and public nuisances. House flies create sanitation issues when they bridge the gap between microbe-rich breeding environments and animal/human habitations. Numerous scientific surveys have demonstrated that house flies harbor bacterial pathogens that pose a threat to humans and animals. More extensive and informative surveys incorporating next-generation sequencing technologies have shown that house fly carriage of pathogens and harmful genetic elements, such as antimicrobial resistance genes, is more widespread and dangerous than previously thought. Further, there is a strong body of research confirming that flies not only harbor but also transmit viable, and presumably infectious, bacterial pathogens. Some pathogens replicate and persist in the fly, permitting prolonged shedding and dissemination. Finally, although the drivers still have yet to be firmly determined, the potential range of dissemination of flies and their associated pathogens can be extensive. Despite this evidence, the house flies’ role as reservoirs, disseminators, and true, yet facultative, vectors for pathogens have been greatly underestimated and underappreciated. In this review, we present key studies that bolster the house fly’s role both an important player in microbial ecology and population biology and as transmitters of microbial threats to animal and human health.

Culicoides biting midges (Diptera: Ceratopogonidae) are a major vector group responsible for the biological transmission of a wide variety of globally significant arboviruses, including bluetongue virus (BTV). In this review we examine current biological resources for the study of this genus, with an emphasis on detailing the history of extant colonies and cell lines derived from C. sonorensis, the major vector of BTV in the USA. We then discuss the rapidly developing area of genomic and transcriptomic analyses of biological processes in vectors and introduce the newly formed Culicoides Genomics and Transcriptomics Alliance. Preliminary results from these fields are detailed and finally likely areas of future research are discussed from an entomological perspective describing limitations in our understanding of Culicoides biology that may impede progress in these areas.

Background: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a recently emerged coronavirus that is the causative agent of the coronavirus disease 2019 (COVID-19) pandemic. COVID-19 in humans is characterized by a wide range of symptoms that range from asymptomatic to mild or severe illness including death. SARS-CoV-2 is highly contagious and is transmitted via the oral–nasal route through droplets and aerosols, or through contact with contaminated fomites. House flies are known to transmit bacterial, parasitic and viral diseases to humans and animals as mechanical vectors. Previous studies have shown that house flies can mechanically transmit coronaviruses, such as turkey coronavirus; however, the house fly’s role in SARS-CoV-2 transmission has not yet been explored. The goal of this work was to investigate the potential of house flies to mechanically transmit SARS-CoV-2. For this purpose, it was determined whether house flies can acquire SARS-CoV-2, harbor live virus and mechanically transmit the virus to naive substrates and surfaces. Methods: Two independent studies were performed to address the study objectives. In the first study, house flies were tested for infectivity after exposure to SARS-CoV-2-spiked medium or milk. In the second study, environmental samples were tested for infectivity after contact with SARS-CoV-2-exposed flies. During both studies, samples were collected at various time points post-exposure and evaluated by SARS-CoV-2-specific RT-qPCR and virus isolation. Results: All flies exposed to SARS-CoV-2-spiked media or milk substrates were positive for viral RNA at 4 h and 24 h post-exposure. Infectious virus was isolated only from the flies exposed to virus-spiked milk but not from those exposed to virus-spiked medium. Moreover, viral RNA was detected in environmental samples after contact with SARS-CoV-2 exposed flies, although no infectious virus was recovered from these samples. Conclusions: Under laboratory conditions, house flies acquired and harbored infectious SARS-CoV-2 for up to 24 h post-exposure. In addition, house flies were able to mechanically transmit SARS-CoV-2 genomic RNA to the surrounding environment up to 24 h post-exposure. Further studies are warranted to determine if house fly transmission occurs naturally and the potential public health implications of such events. Graphical

House flies disseminate numerous species of bacteria acquired during feeding and breeding activities in microbe-rich habitats. Previous house fly surv