Phuong-Thao Tran

Dr. Phuong-Thao Tran

orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
15 March 2020 in Cancers
Verified
Journal Article
Open access
PDF file
TPThanh Huong PHUNG
Thanh Huong PHUNG
SGSanjeev Gurshaney
Sanjeev Gurshaney
BNBINH NGUYEN
BINH NGUYEN
Pham Gia AnhPham Gia Anh
Pham Gia Anh
HNHuy Hoang Nguyen
Huy Hoang Nguyen
HLHUNG LUU
HUNG LUU
With over 1 million incidence cases and more than 780,000 deaths in 2018, gastric cancer (GC) was ranked as the 5th most common cancer and the 3rd leading cause of cancer deaths worldwide. Though several biomarkers, including carcinoembryonic antigen (CEA), cancer antigen 19-9 (CA19-9), and cancer antigen 72-4 (CA72-4), have been identified, their diagnostic accuracies were modest. Circulating tumor cells (CTCs), cells derived from tumors and present in body fluids, have recently emerged as promising biomarkers, diagnostically and prognostically, of cancers, including GC. In this review, we present the landscape of CTCs from migration, to the presence in circulation, biologic properties, and morphologic heterogeneities. We evaluated clinical implications of CTCs in GC patients, including diagnosis, prognosis, and therapeutic management, as well as their application in immunotherapy. On the one hand, major challenges in using CTCs in GC were analyzed, from the differences of cut-off values of CTC positivity, to techniques used for sampling, storage conditions, and CTC molecular markers, as well as the unavailability of relevant enrichment and detection techniques. On the other hand, we discussed future perspectives of using CTCs in GC management and research, including the use of circulating tumor microembolies; of CTC checkpoint blockade in immunotherapy; and of organoid models. Despite the fact that there are remaining challenges in techniques, CTCs have potential as novel biomarkers and/or a non-invasive method for diagnostics, prognostics, and treatment monitoring of GC, particularly in the era of precision medicine.

8 June 2022 in ACS Omega
Verified
Journal Article
Open access
TNTrung Hai Nguyen
Trung Hai Nguyen
PTPhuong-Thao Tran
Phuong-Thao Tran
NPNgoc Quynh Anh Pham
Ngoc Quynh Anh Pham
VHVan-Hai Hoang
Van-Hai Hoang
DHDinh Minh Hiep
Dinh Minh Hiep
TNTung Son Ngo
Tung Son Ngo
Acetylcholinesterase (AChE) is one of the most important drug targets for Alzheimer's disease (AD) treatment. In this work, a machine learning model was trained to rapidly and accurately screen large chemical databases for the potential inhibitors of AChE. The obtained results were then validated via in vitro enzyme assay. Moreover, atomistic simulations including molecular docking and molecular dynamics simulations were then used to understand molecular insights into the binding process of ligands to AChE. In particular, two compounds including benzyl trifluoromethyl ketone and trifluoromethylstyryl ketone were indicated as highly potent inhibitors of AChE because they established IC50 values of 0.51 and 0.33 μM, respectively. The obtained IC50 of two compounds is significantly lower than that of galantamine (2.10 μM). The predicted log(BB) suggests that the compounds may be able to traverse the blood-brain barrier. A good agreement between computational and experimental studies was observed, indicating that the hybrid approach can enhance AD therapy.

14 August 2019 in Journal of Medicinal Chemistry
Verified
Journal Article
Closed access
VHVan-Hai Hoang
Van-Hai Hoang
VNVan T. H. Ngo
Van T. H. Ngo
MCMinghua Cui
Minghua Cui
NMNguyen Van Manh
Nguyen Van Manh
PTPhuong-Thao Tran
Phuong-Thao Tran
JLJeewoo Lee
Jeewoo Lee

27 February 2020 in Journal of Chemical Information and Modeling
Verified
Journal Article
Closed access
HHHuynh Minh Hung
Huynh Minh Hung
MNMinh Tho Nguyen
Minh Tho Nguyen
PTPhuong-Thao Tran
Phuong-Thao Tran
Truong Vi KhanhTruong Vi Khanh
Truong Vi Khanh
JCJames Chapman
James Chapman
TNTung Son Ngo
Tung Son Ngo

1 January 2019 in Journal of Enzyme Inhibition and Medicinal Chemistry
Verified
Journal Article
Open access
LHLe Cong Huan
Le Cong Huan
CPCao Viet Phuong
Cao Viet Phuong
LTLe Cong Truc
Le Cong Truc
VTVo Nguyen Thanh
Vo Nguyen Thanh
Hai Pham-TheHai Pham-The
Hai Pham-The
NHNguyen Hai-Nam
Nguyen Hai-Nam
In our search for novel small molecules activating procaspase-3, we have designed and synthesised a series of novel acetohydrazides incorporating quinazolin-4(3H)-ones (5, 6, 7). Biological evaluation revealed eight compounds with significant cytotoxicity against three human cancer cell lines (SW620, colon cancer; PC-3, prostate cancer; NCI-H23, lung cancer). The most potent compound 5t displayed cytotoxicity up to 5-fold more potent than 5-FU. Analysis of structure-activity relationships showed that the introduction of different substituents at C-6 position on the quinazolin-4(3H)-4-one moiety, such as 6-chloro or 6-methoxy potentially increased the cytotoxicity of the compounds. In term of caspase activation activity, several compounds were found to exhibit potent effects, (e.g. compounds 7 b, 5n, and 5l). Especially, compound 7 b activated caspases activity by almost 200% in comparison to that of PAC-1. Further docking simulation also revealed that this compound potentially is a potent allosteric inhibitor of procaspase-3. Graphical Abstract

19 September 2019 in RSC Advances
Verified
Journal Article
Open access
PDF file
PTPhuong-Thao Tran
Phuong-Thao Tran
VHVan-Hai Hoang
Van-Hai Hoang
JLJeewoo Lee
Jeewoo Lee
THTran Thi Thu Hien
Tran Thi Thu Hien
NTNguyen Thanh Tung
Nguyen Thanh Tung
TNTung Son Ngo
Tung Son Ngo
Alzheimer's disease (AD) is the most common form of neurodegenerative disease currently. It is widely accepted that AD is characterized by the self-assembly of amyloid beta (Aβ) peptides. The human glutaminyl cyclase (hQC) enzyme is characterized by association with Aβ peptide generation. The development of hQC inhibitors could prevent the self-aggregation of Aβ peptides, resulting in impeding AD. Utilizing structural knowledge of the hQC substrates and known hQC inhibitors, new heterocyclic and peptidomimetic derivatives were synthesized and were able to inhibit the hQC enzyme. The inhibiting abilities of these compounds were evaluated using a fluorometric assay. The binding mechanism at the atomic level was estimated using molecular docking, free energy perturbation, and quantum chemical calculation methods. The predicted log(BBB) and human intestinal absorption values indicated that these compounds are able to permeate the blood–brain barrier and be well-absorbed through the gastrointestinal tract. Overall, 5,6-dimethoxy-N-(3-(5-methyl-1H-imidazol-1-yl)propyl)-1H-benzo[d]imidazol-2-amine (1_2) was indicated as a potential drug for AD treatment.