Shuichi Shimma

Prof. Dr. Shuichi Shimma

Department of Biotechnology, Graduate School of Engineering, Osaka University, Osaka 565-0871, Japan
orcid

Research Focus & Metrics

Academic Career Length

17Years (2010-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 August 2022 in mSystems
Verified
Journal Article
Open access
ASAkito Sakanaka
Akito Sakanaka
MKMasae Kuboniwa
Masae Kuboniwa
Shuichi ShimmaShuichi Shimma
Shuichi Shimma
SASamar A. Alghamdi
Samar A. Alghamdi
SMShota Mayumi
Shota Mayumi
AAAtsuo Amano
Atsuo Amano
Periodontitis is caused by a pathogenic shift in subgingival biofilm ecosystems, which is accompanied by alterations in microbiome composition and function, including changes in the metabolic activity of the biofilm, which comprises multiple commensals and pathogens. While Fusobacterium nucleatum is a common constituent of the supra- and subgingival biofilms, its metabolic integration within polymicrobial communities and the impact on periodontal pathogenesis are poorly understood.

22 September 2010 in Analytical Chemistry
Verified
Journal Article
Closed access
Shuichi ShimmaShuichi Shimma
Shuichi Shimma
HNHirofumi Nagao
Hirofumi Nagao
JAJun Aoki
Jun Aoki
KTKeiji Takahashi
Keiji Takahashi
SMShinichi Miki
Shinichi Miki
MTMichisato Toyoda
Michisato Toyoda

16 June 2019 in Analytical Chemistry
Verified
Journal Article
Closed access
ETEmi Takeo
Emi Takeo
YSYuki Sugiura
Yuki Sugiura
TUTatsuki Uemura
Tatsuki Uemura
KNKoshiro Nishimoto
Koshiro Nishimoto
MYMasanori Yasuda
Masanori Yasuda
Shuichi ShimmaShuichi Shimma
Shuichi Shimma

31 August 2020 in Analytical Chemistry
Verified
Journal Article
Closed access
ETEmi Takeo
Emi Takeo
EFEiichiro Fukusaki
Eiichiro Fukusaki
Shuichi ShimmaShuichi Shimma
Shuichi Shimma

1 December 2021 in Journal of Experimental Botany
Verified
Journal Article
Open access
PDF file
Atsushi OkazawaAtsushi Okazawa
Atsushi Okazawa
ABAtsuya Baba
Atsuya Baba
HOHikaru Okano
Hikaru Okano
TTTomoya Tokunaga
Tomoya Tokunaga
TNTsubasa Nakaue
Tsubasa Nakaue
DODaisaku Ohta
Daisaku Ohta
Root parasitic weeds of the Orobanchaceae, such as witchweeds (Striga spp.) and broomrapes (Orobanche and Phelipanche spp.), cause serious losses in agriculture worldwide, and efforts have been made to control these parasitic weeds. Understanding the characteristic physiological processes in the life cycle of root parasitic weeds is particularly important to identify specific targets for growth modulators. In our previous study, planteose metabolism was revealed to be activated soon after the perception of strigolactones in germinating seeds of O. minor. Nojirimycin inhibited planteose metabolism and impeded seed germination of O. minor, indicating a possible target for root parasitic weed control. In the present study, we investigated the distribution of planteose in dry seeds of O. minor by matrix-assisted laser desorption/ionization–mass spectrometry imaging. Planteose was detected in tissues surrounding—but not within—the embryo, supporting its suggested role as a storage carbohydrate. Biochemical assays and molecular characterization of an α-galactosidase family member, OmAGAL2, indicated that the enzyme is involved in planteose hydrolysis in the apoplast around the embryo after the perception of strigolactones, to provide the embryo with essential hexoses for germination. These results indicate that OmAGAL2 is a potential molecular target for root parasitic weed control.

1 July 2020 in Biochemical and Biophysical Research Communications
Verified
Journal Article
Closed access
ESEmiko Sato
Emiko Sato
YTYukako Tsunokuni
Yukako Tsunokuni
MKManami Kaneko
Manami Kaneko
DSDaisuke Saigusa
Daisuke Saigusa
RSRitsumi Saito
Ritsumi Saito
NTNobuyuki Takahashi
Nobuyuki Takahashi