Omar Alsager

Dr. Omar Alsager


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2018 in Ecotoxicology and Environmental Safety
Verified
Journal Article
Closed access
OAOmar Alsager
Omar Alsager
MAMohammed N. Alnajrani
Mohammed N. Alnajrani
HAHatem A. Abuelizz
Hatem A. Abuelizz
IAIbrahim A. Aldaghmani
Ibrahim A. Aldaghmani

21 October 2020 in Antibiotics
Verified
Journal Article
Open access
PDF file
MAMossab Alsaedi
Mossab Alsaedi
GAGhada K. Alothman
Ghada K. Alothman
MAMohammed Alnajrani
Mohammed Alnajrani
OAOmar Alsager
Omar Alsager
SASultan A. Alshmimri
Sultan A. Alshmimri
SASeetah Alharbi
Seetah Alharbi
Bacterial antibiotic resistance has been deemed one of the largest modern threats to human health. One of the root causes of antibiotic resistance is the inability of traditional wastewater management techniques, such as filtration and disinfection, to completely eliminate residual antibiotics from domestic and industrial effluents. In this study, we examine the ability of UiO-66; a metal-organic framework (MOF); in removing the antibiotic Doxycycline from aqueous environments. This study’s findings suggest that UiO-66 was able to remove nearly 90% of the initial Doxycycline concentration. To correlate the isothermal data, Langmuir and Freundlich models were used. It was determined that the Langmuir model was best suited. Pseudo-first and -second order models were examined for kinetic data, where the pseudo-second order model was best suited—consistent with the maximum theoretical adsorption capacity found by the Langumir model. Thermodynamic analysis was also examined by studying UiO-66 adsorption under different temperatures. Mechanisms of adsorption were also analyzed through measuring adsorption at varying pH levels, thermogravimetric analysis (TGA), Infrared spectroscopy (IR) and Brunauer–Emmet–Teller (BET). This study also explores the possibility of recycling MOFs through exposure to gamma radiation, heat, and heating under low pressure, in order for UiO-66 to be used in multiple, consecutive cycles of Doxycycline removal.

28 August 2018 in Scientific Reports
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Journal Article
Open access
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OAOmar Alsager
Omar Alsager
KAKhalid M. Alotaibi
Khalid M. Alotaibi
AAAbdullah M. Alswieleh
Abdullah M. Alswieleh
BABaraa J. Alyamani
Baraa J. Alyamani
Colorimetric aptasensors based on gold nanoparticles (AuNPs) commonly feature ssDNA probes nonspecifically adsorbed to surface gold particles. A major limitation of this versatile method is the incomplete dissociation of the adsorbed nontarget binding segments of the aptamer sequence upon target binding. This results in weak or nonexistent sensor performance by preventing the particles from aggregating when the optimized salt concentration is added. Rather than removing the nonbinding nucleotides flanking the binding region of the aptamer, proposed herein is an alternative strategy, simply introducing a centrifugation and resuspension step after target recognition that eliminates residual binding between the aptamer and the surface of the particles. The performance of two different vitamin D3 (VTD3) aptamers were tested. The method enhanced the performance of the sensor that used the higher detection limit (1 µM) aptamer by fourfold. The superiority of the proposed method became apparent in a nonworking colorimetric sensor became a highly sensitive sensor with a one nanomolar detection level and excellent discrimination against potential interfering molecules including VTD2 when the centrifugation and resuspension process was implemented. The level of VTD3 in human blood was determined colorimetrically after extraction with n-hexane. The results were in agreement with those obtained by HPLC. The proposed method could be applied to aptamers targeting small molecules with no need to reprocess the SELEX-isolated sequence by knowing the binding region and removing the flanking primers.

1 December 2019 in Analytical Biochemistry
Verified
Journal Article
Closed access
MAMohammed N. Alnajrani
Mohammed N. Alnajrani
OAOmar Alsager
Omar Alsager

1 May 2020 in Journal of Hazardous Materials
Verified
Journal Article
Closed access
MAMohammed N. Alnajrani
Mohammed N. Alnajrani
OAOmar Alsager
Omar Alsager

26 September 2019 in Sensors
Verified
Journal Article
Open access
PDF file
BABaraa J. Alyamani
Baraa J. Alyamani
OAOmar Alsager
Omar Alsager
MZMohammed Zourob
Mohammed Zourob
Signal transduction based on fluorescence is one of the most common optical aptasensors for small molecules. Sensors with a number of unique features including high sensitivity, low cost, and simple operation can be constructed easily. However, the label-free fluorescent approach is limited to synthetic dyes that bind strongly to the aptamer sequence and result in a diminished sensor operation with high detection limits. In this study, we report the use of curcumin as a fluorescent probe to signal aptamer/small target binding events. A substantial enhancement in curcumin’s fluorescent emission was observed when bound into the grooves of vitamin D3 (VTD3) binding aptamer, as an example. However, the introduction of the target molecule causes the aptamer to undergo a conformational change that favors complexing the target molecule over binding the curcumin dye. The sensor was able to detect VTD3 down to 1 fM concentration in buffer solutions and extracted blood samples, operate at a wide dynamic range, and discriminate against potential biological interfering molecules including VTD2. The operation of the curcumin based fluorescent sensor is at least six orders of magnitude more sensitive than a VTD3 sensor constructed with the synthetic dye SYBR Green I. The generality of the reported label-free approach was applied with a previously isolated 75-mer bisphenol-A (BPA) aptamer, confirming that the reported sensing strategy is not confined on a particular aptamer sequence. Our work not only reports a novel sensor format for the detection of small molecules, but also serves fluorescent sensor’s most pressing need being novel fluorophores for multiplex targets detection.