Pushkar Shrestha

Dr. Pushkar Shrestha

orcid

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 October 2013 in Plant Biotechnology Journal
Verified
Journal Article
Open access
PDF file
TVThomas Vanhercke
Thomas Vanhercke
ATAnna El Tahchy
Anna El Tahchy
QLqing liu
qing liu
XZXue-Rong Zhou
Xue-Rong Zhou
PSPushkar Shrestha
Pushkar Shrestha
JPJames R. Petrie
James R. Petrie
Summary: High biomass crops have recently attracted significant attention as an alternative platform for the renewable production of high energy storage lipids such as triacylglycerol (TAG). While TAG typically accumulates in seeds as storage compounds fuelling subsequent germination, levels in vegetative tissues are generally low. Here, we report the accumulation of more than 15% TAG (17.7% total lipids) by dry weight in Nicotiana tabacum (tobacco) leaves by the co‐expression of three genes involved in different aspects of TAG production without severely impacting plant development. These yields far exceed the levels found in wild‐type leaf tissue as well as previously reported engineered TAG yields in vegetative tissues of Arabidopsis thaliana and N. tabacum. When translated to a high biomass crop, the current levels would translate to an oil yield per hectare that exceeds those of most cultivated oilseed crops. Confocal fluorescence microscopy and mass spectrometry imaging confirmed the accumulation of TAG within leaf mesophyll cells. In addition, we explored the applicability of several existing oil‐processing methods using fresh leaf tissue. Our results demonstrate the technical feasibility of a vegetative plant oil production platform and provide for a step change in the bioenergy landscape, opening new prospects for sustainable food, high energy forage, biofuel and biomaterial applications.

8 January 2013 in FEBS Letters
Verified
Journal Article
Open access
TVThomas Vanhercke
Thomas Vanhercke
ATAnna El Tahchy
Anna El Tahchy
PSPushkar Shrestha
Pushkar Shrestha
XZXue-Rong Zhou
Xue-Rong Zhou
Surinder SinghSurinder Singh
Surinder Singh
JPJames R. Petrie
James R. Petrie
Metabolic engineering approaches to increase plant oil levels can generally be divided into categories which increase fatty acid biosynthesis (‘Push’), are involved in TAG assembly (‘Pull’) or increase TAG storage/decrease breakdown (‘Accumulation’). In this study, we describe the surprising synergy when Push (WRI1) and Pull (DGAT1) approaches are combined. Co‐expression of these genes in the Nicotiana benthamiana transient leaf expression system resulted in TAG levels exceeding those expected from an additive effect and biochemical tracer studies confirmed increased flux of carbon through fatty acid and TAG synthesis pathways. Leaf fatty acid profile also synergistically shifts from polyunsaturated to monounsaturated fatty acids.

7 November 2012 in PLOS ONE
Verified
Journal Article
Open access
PDF file
JPJames R. Petrie
James R. Petrie
PSPushkar Shrestha
Pushkar Shrestha
XZXue-Rong Zhou
Xue-Rong Zhou
MMMaged P. Mansour
Maged P. Mansour
QLqing liu
qing liu
Surinder SinghSurinder Singh
Surinder Singh
Omega-3 long-chain (≥C20) polyunsaturated fatty acids (ω3 LC-PUFA) have critical roles in human health and development with studies indicating that deficiencies in these fatty acids can increase the risk or severity of cardiovascular and inflammatory diseases in particular. These fatty acids are predominantly sourced from fish and algal oils, but it is widely recognised that there is an urgent need for an alternative and sustainable source of EPA and DHA. Since the earliest demonstrations of ω3 LC-PUFA engineering there has been good progress in engineering the C20 EPA with seed fatty acid levels similar to that observed in bulk fish oil (∼18%), although undesirable ω6 PUFA levels have also remained high. The transgenic seed production of the particularly important C22 DHA has been problematic with many attempts resulting in the accumulation of EPA/DPA, but only a few percent of DHA. This study describes the production of up to 15% of the C22 fatty acid DHA in Arabidopsis thaliana seed oil with a high ω3/ω6 ratio. This was achieved using a transgenic pathway to increase the C18 ALA which was then converted to DHA by a microalgal Δ6-desaturase pathway. The amount of DHA described in this study exceeds the 12% level at which DHA is generally found in bulk fish oil. This is a breakthrough in the development of sustainable alternative sources of DHA as this technology should be applicable in oilseed crops. One hectare of a Brassica napus crop containing 12% DHA in seed oil would produce as much DHA as approximately 10,000 fish.

6 November 2009 in Plant Biotechnology Journal
Verified
Journal Article
Closed access
PDF file
CWCraig C. Wood
Craig C. Wood
JPJames R. Petrie
James R. Petrie
PSPushkar Shrestha
Pushkar Shrestha
MMMaged P. Mansour
Maged P. Mansour
PNPeter D. Nichols
Peter D. Nichols
Surinder SinghSurinder Singh
Surinder Singh

1 January 2017 in Metabolic Engineering
Verified
Journal Article
Open access
TVThomas Vanhercke
Thomas Vanhercke
UDUday K. Divi
Uday K. Divi
ATAnna El Tahchy
Anna El Tahchy
QLqing liu
qing liu
MMMadeline Mitchell
Madeline Mitchell
JPJames R. Petrie
James R. Petrie
Synthesis and accumulation of plant oils in the entire vegetative biomass offers the potential to deliver yields surpassing those of oilseed crops. However, current levels still fall well short of those typically found in oilseeds. Here we show how transcriptome and biochemical analyses pointed to a futile cycle in a previously established Nicotiana tabacum line, accumulating up to 15% (dry weight) of the storage lipid triacylglycerol in leaf tissue. To overcome this metabolic bottleneck, we either silenced the SDP1 lipase or overexpressed the Arabidopsis thaliana LEC2 transcription factor in this transgenic background. Both strategies independently resulted in the accumulation of 30-33% triacylglycerol in leaf tissues. Our results demonstrate that the combined optimization of de novo fatty acid biosynthesis, storage lipid assembly and lipid turnover in leaf tissue results in a major overhaul of the plant central carbon allocation and lipid metabolism. The resulting further step changes in oil accumulation in the entire plant biomass offers the possibility of delivering yields that outperform current oilseed crops.

1 May 2010 in Metabolic Engineering
Verified
Journal Article
Closed access
JPJames R. Petrie
James R. Petrie
PSPushkar Shrestha
Pushkar Shrestha
MMMaged P. Mansour
Maged P. Mansour
PNPeter D. Nichols
Peter D. Nichols
QLqing liu
qing liu
Surinder SinghSurinder Singh
Surinder Singh