Samir Kumar-Singh

Prof. Dr. Samir Kumar-Singh

Faculty of Medical & Health Sciences, Group Leader - Molecular Pathology Laboratory of Cell Biology & Histology, Universiteit Antwerpen, Antwerpen, Belgium
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Research Focus & Metrics

Academic Career Length

33Years (1994-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 July 2006 in Nature
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Journal Article
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MCMarc Cruts
Marc Cruts
IGIlse Gijselinck
Ilse Gijselinck
JZJulie van der Zee
Julie van der Zee
SESebastiaan Engelborghs
Sebastiaan Engelborghs
HWHans Wils
Hans Wils
CBChristine Van Broeckhoven
Christine Van Broeckhoven

19 November 2009 in Acta Neuropathologica
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Journal Article
Open access
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IMIan R. A. Mackenzie
Ian R. A. Mackenzie
MNManuela Neumann
Manuela Neumann
EBEileen H. Bigio
Eileen H. Bigio
NCNigel J. Cairns
Nigel J. Cairns
IAIrina Alafuzoff
Irina Alafuzoff
DMDavid M. A. Mann
David M. A. Mann

7 July 2016 in Eurosurveillance
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Journal Article
Open access
BXBasil Britto Xavier
Basil Britto Xavier
CLChristine Lammens
Christine Lammens
RRRohit Ruhal
Rohit Ruhal
SKSamir Kumar-Singh
Samir Kumar-Singh
Patrick ButayePatrick Butaye
Patrick Butaye
SMSurbhi Malhotra-Kumar
Surbhi Malhotra-Kumar
We identified a novel plasmid-mediated colistin-resistance gene in porcine and bovine colistin-resistant Escherichia coli that did not contain mcr-1. The gene, termed mcr-2, a 1,617 bp phosphoethanolamine transferase harboured on an IncX4 plasmid, has 76.7% nucleotide identity to mcr-1. Prevalence of mcr-2 in porcine colistin-resistant E. coli (11/53) in Belgium was higher than that of mcr-1 (7/53). These data call for an immediate introduction of mcr-2 screening in ongoing molecular epidemiological surveillance of colistin-resistant Gram-negative pathogens.

14 February 2010 in Nature Genetics
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VDVivianna M Van Deerlin
Vivianna M Van Deerlin
PSPatrick M A Sleiman
Patrick M A Sleiman
MMMaria Martinez-Lage
Maria Martinez-Lage
ACAlice Chen-Plotkin
Alice Chen-Plotkin
LWLi-San Wang
Li-San Wang
VLVirginia M-Y Lee
Virginia M-Y Lee
Vivianna Van Deerlin and colleagues report that common variants at 7p21 are associated with a subtype of frontotemporal lobar degeneration marked by TDP-43 inclusions. They further show that the risk alleles are associated with elevated brain expression of TMEM106B, which resides at the peak of association on 7p21. Frontotemporal lobar degeneration (FTLD) is the second most common cause of presenile dementia. The predominant neuropathology is FTLD with TAR DNA-binding protein (TDP-43) inclusions (FTLD-TDP)1. FTLD-TDP is frequently familial, resulting from mutations in GRN (which encodes progranulin). We assembled an international collaboration to identify susceptibility loci for FTLD-TDP through a genome-wide association study of 515 individuals with FTLD-TDP. We found that FTLD-TDP associates with multiple SNPs mapping to a single linkage disequilibrium block on 7p21 that contains TMEM106B. Three SNPs retained genome-wide significance following Bonferroni correction (top SNP rs1990622, P = 1.08 × 10−11; odds ratio, minor allele (C) 0.61, 95% CI 0.53–0.71). The association replicated in 89 FTLD-TDP cases (rs1990622; P = 2 × 10−4). TMEM106B variants may confer risk of FTLD-TDP by increasing TMEM106B expression. TMEM106B variants also contribute to genetic risk for FTLD-TDP in individuals with mutations in GRN. Our data implicate variants in TMEM106B as a strong risk factor for FTLD-TDP, suggesting an underlying pathogenic mechanism.

23 February 2010 in Proceedings of the National Academy of Sciences
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HWHans Wils
Hans Wils
GKGernot Kleinberger
Gernot Kleinberger
JJJonathan Janssens
Jonathan Janssens
SPSandra Pereson
Sandra Pereson
GJGeert Joris
Geert Joris
SKSamir Kumar-Singh
Samir Kumar-Singh
Neuronal cytoplasmic and intranuclear aggregates of RNA-binding protein TDP-43 are a hallmark feature of neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD). ALS and FTLD show a considerable clinical and pathological overlap and occur as both familial and sporadic forms. Though missense mutations in TDP-43 cause rare forms of familial ALS, it is not yet known whether this is due to loss of TDP-43 function or gain of aberrant function. Moreover, the role of wild-type (WT) TDP-43, associated with the majority of familial and sporadic ALS/FTLD patients, is also currently unknown. Generating homozygous and hemizygous WT human TDP-43 transgenic mouse lines, we show here a dose-dependent degeneration of cortical and spinal motor neurons and development of spastic quadriplegia reminiscent of ALS. A dose-dependent degeneration of nonmotor cortical and subcortical neurons characteristic of FTLD was also observed. Neurons in the affected spinal cord and brain regions showed accumulation of TDP-43 nuclear and cytoplasmic aggregates that were both ubiquitinated and phosphorylated as observed in ALS/FTLD patients. Moreover, the characteristic ≈25-kDa C-terminal fragments (CTFs) were also recovered from nuclear fractions and correlated with disease development and progression in WT TDP-43 mice. These findings suggest that ≈25-kDa TDP-43 CTFs are noxious to neurons by a gain of aberrant nuclear function.

18 November 2008 in Acta Neuropathologica
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IMIan R. A. Mackenzie
Ian R. A. Mackenzie
MNManuela Neumann
Manuela Neumann
EBEileen H. Bigio
Eileen H. Bigio
NCNigel J. Cairns
Nigel J. Cairns
IAIrina Alafuzoff
Irina Alafuzoff
DMDavid M. A. Mann
David M. A. Mann