Aaron Golden

Dr. Aaron Golden


Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 February 2020 in Molecular Psychiatry
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ICIsabelle Cleynen
Isabelle Cleynen
WEWorrawat Engchuan
Worrawat Engchuan
MHMatthew S. Hestand
Matthew S. Hestand
THTracy Heung
Tracy Heung
AHAaron M. Holleman
Aaron M. Holleman
ABAnne S. Bassett
Anne S. Bassett

1 January 2022 in The Astrophysical Journal
Verified
Journal Article
Open access
DFDúalta Ó Fionnagáin
Dúalta Ó Fionnagáin
RKRobert D. Kavanagh
Robert D. Kavanagh
AVAline A. Vidotto
Aline A. Vidotto
SJSandra V. Jeffers
Sandra V. Jeffers
PPPascal Petit
Pascal Petit
(C(BCool Collaboration)
(BCool Collaboration)
We simulate possible stellar coronal mass ejection (CME) scenarios over the magnetic cycle of ϵ Eridani (18 Eridani; HD 22049). We use three separate epochs from 2008, 2011, and 2013, and estimate the radio emission frequencies associated with these events. These stellar eruptions have proven to be elusive, although a promising approach to detect and characterize these phenomena are low-frequency radio observations of potential type II bursts as CME-induced shocks propagate through the stellar corona. Stellar type II radio bursts are expected to emit below 450 MHz, similarly to their solar counterparts. We show that the length of time these events remain above the ionospheric cutoff is not necessarily dependent on the stellar magnetic cycle, but more on the eruption location relative to the stellar magnetic field. We find that these type II bursts would remain within the frequency range of LOFAR for a maximum of 20–30 minutes post-eruption for the polar CMEs (50 minutes for second harmonics). We find evidence of slower equatorial CMEs, which result in slightly longer observable windows for the 2008 and 2013 simulations. Stellar magnetic geometry and strength have a significant effect on the detectability of these events. We place the CMEs in the context of the stellar mass-loss rate (27–48× solar mass-loss rate), showing that they can amount to 3%–50% of the stellar wind mass-loss rate for ϵ Eridani. Continuous monitoring of likely stellar CME candidates with low-frequency radio telescopes will be required to detect these transient events.

29 November 2024 in Astronomy & Astrophysics
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Journal Article
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SSS. C. Susarla
S. C. Susarla
ACA. Chalumeau
A. Chalumeau
CTC. Tiburzi
C. Tiburzi
EKE. F. Keane
E. F. Keane
JVJoris Verbiest
Joris Verbiest
CVC. Vocks
C. Vocks
Context. High-precision pulsar timing is highly dependent on the precise and accurate modelling of any effects that can potentially impact the data. In particular, effects that contain stochastic elements contribute to some level of corruption and complexity in the analysis of pulsar-timing data. It has been shown that commonly used solar wind models do not accurately account for variability in the amplitude of the solar wind on both short and long timescales. Aims. In this study, we test and validate a new, cutting-edge solar wind modelling method included in the enterprise software suite (widely used for pulsar noise analysis) through extended simulations. We use it to investigate temporal variability in LOFAR data. Our model testing scheme in itself provides an invaluable asset for pulsar timing array (PTA) experiments. Since, improperly accounting for the solar wind signature in pulsar data can induce false-positive signals, it is of fundamental importance to include in any such investigations. Methods. We employed a Bayesian approach utilising a continuously varying Gaussian process to model the solar wind. It uses a spherical approximation that modulates the electron density. This method, which we refer to as a solar wind Gaussian process (SWGP), has been integrated into existing noise analysis software, specifically enterprise. Our Validation of this model was performed through simulations. We then conduct noise analysis on eight pulsars from the LOFAR dataset, with most pulsars having a time span of ∼11 years encompassing one full solar activity cycle. Furthermore, we derived the electron densities from the dispersion measure values obtained by the SWGP model. Results. Our analysis reveals a strong correlation between the electron density at 1 AU and the ecliptic latitude (ELAT) of the pulsar. Pulsars with |ELAT|< 3° exhibit significantly higher average electron densities. Furthermore, we observed distinct temporal patterns in the electron densities in different pulsars. In particular, pulsars within |ELAT|< 3° exhibit similar temporal variations, while the electron densities of those outside this range correlate with the solar activity cycle. Notably, some pulsars exhibit sensitivity to the solar wind up to 45° away from the Sun in LOFAR data. Conclusions. The continuous variability in electron density offered in this model represents a substantial improvement over previous models, that assume a single value for piece-wise bins of time. This advancement holds promise for solar wind modelling in future International Pulsar Timing Array (IPTA) data combinations.

22 January 2025 in Remote Sensing
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JOJemima Francesca O'Farrell
Jemima Francesca O'Farrell
DODualta O’fionnagáin
Dualta O’fionnagáin
ABAbosede Omowumi Babatunde
Abosede Omowumi Babatunde
MGMicheal Geever
Micheal Geever
PCPatricia Codyre
Patricia Codyre
AGAaron Golden
Aaron Golden
The extraction, processing and transport of crude oil in the Niger Delta region of Nigeria has long been associated with collateral environmental damage to the largest mangrove ecosystem in Africa. Oil pollution is impacting not only one of the planet’s most ecologically diverse regions but also the health, livelihoods, and social cohesion of the Delta region inhabitants. Quantifying and directly associating localised oil pollution events to specific petrochemical infrastructure is complicated by the difficulty of monitoring such vast and complex terrain, with documented concerns regarding the thoroughness and impartiality of reported oil pollution events. Earth Observation (EO) offers a means to deliver such a monitoring and assessment capability using Normalised Difference Vegetation Index (NDVI) measurements as a proxy for mangrove biomass health. However, the utility of EO can be impacted by persistent cloud cover in such regions. To overcome such challenges here, we present a workflow that leverages EO-derived high-resolution (10 m) synthetic aperture radar data from the Sentinel-1 satellite constellation combined with machine learning to conduct observations of the spatial land cover changes associated with oil pollution-induced mangrove mortality proximal to pipeline networks in a 9000 km2 region of Rivers State located near Port Harcourt. Our analysis identified significant deforestation from 2016–2024, with an estimated mangrove mortality rate of 5644 hectares/year. Using our empirically derived Pipeline Impact Indicator (PII), we mapped the oil pipeline network to 1 km resolution, highlighting specific pipeline locations in need of immediate intervention and restoration, and identified several new pipeline sites showing evidence of significant oil spill damage that have yet to be formally reported. Our findings emphasise the critical need for the continuous and comprehensive monitoring of oil extractive regions using satellite remote sensing to support decision-making and policies to mitigate environmental and societal damage from pipeline oil spills, particularly in ecologically vulnerable regions such as the Niger Delta.

30 January 2020 in Bioinformatics
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KSKevin R Shieh
Kevin R Shieh
CKChristina Kratschmer
Christina Kratschmer
KMKeith E Maier
Keith E Maier
JGJohn M Greally
John M Greally
MLMatthew Levy
Matthew Levy
AGAaron Golden
Aaron Golden
High-throughput sequencing can enhance the analysis of aptamer libraries generated by the Systematic Evolution of Ligands by EXponential enrichment. Robust analysis of the resulting sequenced rounds is best implemented by determining a ranked consensus of reads following the processing by multiple aptamer detection algorithms. While several such approaches have been developed to this end, their installation and implementation is problematic. We developed AptCompare, a cross-platform program that combines six of the most widely used analytical approaches for the identification of RNA aptamer motifs and uses a simple weighted ranking to order the candidate aptamers, all driven within the same GUI-enabled environment. We demonstrate AptCompare’s performance by identifying the top-ranked candidate aptamers from a previously published selection experiment in our laboratory, with follow-up bench assays demonstrating good correspondence between the sequences’ rankings and their binding affinities. The source code and pre-built virtual machine images are freely available at https://bitbucket.org/shiehk/aptcompare. Supplementary data are available at Bioinformatics online.

28 October 2021 in Astronomy & Astrophysics
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PMPearse Murphy
Pearse Murphy
PCP. Callanan
P. Callanan
JMJ. McCauley
J. McCauley
DMD. J. McKenna
D. J. McKenna
DFD. Ó Fionnagáin
D. Ó Fionnagáin
EAEt al
Et al
Modern radio interferometers such as the LOw Frequency ARray (LOFAR) are capable of producing data at hundreds of gigabits to terabits per second. This high data rate makes the analysis of radio data cumbersome and computationally expensive. While high performance computing facilities exist for large national and international facilities, that may not be the case for instruments operated by a single institution or a small consortium. Data rates for next generation radio telescopes are set to eclipse those currently in operation, hence local processing of data will become all the more important. Here, we introduce the REAL-time Transient Acquisition backend (REALTA), a computing backend at the Irish LOFAR station (I-LOFAR) which facilitates the recording of data in near real-time and post-processing. We also present first searches and scientific results of a number of radio phenomena observed by I-LOFAR and REALTA, including pulsars, fast radio bursts, rotating radio transients, the search for extraterrestrial intelligence, Jupiter, and the Sun.