Gašper Slapničar

Mr. Gašper Slapničar

Jožef Stefan Institute
orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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4 August 2019 in Sensors
Verified
Journal Article
Open access
PDF file
GSGašper Slapničar
Gašper Slapničar
NMNejc Mlakar
Nejc Mlakar
Mitja LuštrekMitja Luštrek
Mitja Luštrek
Blood pressure (BP) is a direct indicator of hypertension, a dangerous and potentially deadly condition. Regular monitoring of BP is thus important, but many people have aversion towards cuff-based devices, and their limitation is that they can only be used at rest. Using just a photoplethysmogram (PPG) to estimate BP is a potential solution investigated in our study. We analyzed the MIMIC III database for high-quality PPG and arterial BP waveforms, resulting in over 700 h of signals after preprocessing, belonging to 510 subjects. We then used the PPG alongside its first and second derivative as inputs into a novel spectro-temporal deep neural network with residual connections. We have shown in a leave-one-subject-out experiment that the network is able to model the dependency between PPG and BP, achieving mean absolute errors of 9.43 for systolic and 6.88 for diastolic BP. Additionally we have shown that personalization of models is important and substantially improves the results, while deriving a good general predictive model is difficult. We have made crucial parts of our study, especially the list of used subjects and our neural network code, publicly available, in an effort to provide a solid baseline and simplify potential comparison between future studies on an explicit MIMIC III subset.

5 March 2021 in JMIR Medical Informatics
Verified
Journal Article
Open access
Mitja LuštrekMitja Luštrek
Mitja Luštrek
MBMarko Bohanec
Marko Bohanec
CBCarlos Cavero Barca
Carlos Cavero Barca
MCMaria Costanza Ciancarelli
Maria Costanza Ciancarelli
ECEls Clays
Els Clays
AVAljoša Vodopija
Aljoša Vodopija
Background: Congestive heart failure (CHF) is a disease that requires complex management involving multiple medications, exercise, and lifestyle changes. It mainly affects older patients with depression and anxiety, who commonly find management difficult. Existing mobile apps supporting the self-management of CHF have limited features and are inadequately validated.Objective: The HeartMan project aims to develop a personal health system that would comprehensively address CHF self-management by using sensing devices and artificial intelligence methods. This paper presents the design of the system and reports on the accuracy of its patient-monitoring methods, overall effectiveness, and patient perceptions.Methods: A mobile app was developed as the core of the HeartMan system, and the app was connected to a custom wristband and cloud services. The system features machine learning methods for patient monitoring: continuous blood pressure (BP) estimation, physical activity monitoring, and psychological profile recognition. These methods feed a decision support system that provides recommendations on physical health and psychological support. The system was designed using a human-centered methodology involving the patients throughout development. It was evaluated in a proof-of-concept trial with 56 patients.Results: Fairly high accuracy of the patient-monitoring methods was observed. The mean absolute error of BP estimation was 9.0 mm Hg for systolic BP and 7.0 mm Hg for diastolic BP. The accuracy of psychological profile detection was 88.6%. The F-measure for physical activity recognition was 71%. The proof-of-concept clinical trial in 56 patients showed that the HeartMan system significantly improved self-care behavior (P=.02), whereas depression and anxiety rates were significantly reduced (P<.001), as were perceived sexual problems (P=.01). According to the Unified Theory of Acceptance and Use of Technology questionnaire, a positive attitude toward HeartMan was seen among end users, resulting in increased awareness, self-monitoring, and empowerment.Conclusions: The HeartMan project combined a range of advanced technologies with human-centered design to develop a complex system that was shown to help patients with CHF. More psychological than physical benefits were observed.Trial Registration: ClinicalTrials.gov NCT03497871; https://clinicaltrials.gov/ct2/history/NCT03497871.International Registered Report Identifier (IRRID): RR2-10.1186/s12872-018-0921-2

11 May 2024 in ACM Transactions on Sensor Networks
Verified
Journal Article
Open access
GSGašper Slapničar
Gašper Slapničar
Wenjin WangWenjin Wang
Wenjin Wang
Mitja LuštrekMitja Luštrek
Mitja Luštrek
Contact-free sensing gained much traction in the past decade. While remote monitoring of some parameters (heart rate) is approaching clinical levels of precision, others remain challenging (blood pressure). We investigated the feasibility of estimating blood pressure (BP) via pulse transit time (PTT) in a novel remote single-site manner, using a modified RGB camera. A narrow-band triple band-pass filter allowed us to measure the PTT between different skin layers, harvesting information from green and near-infrared wavelengths. The filter minimizes the inter-channel influence and band overlap, however, some overlap remains within the filter bands. We further resolve this using a color-channel model and a novel channel-separation method. Using the proposed setup and algorithm, we obtained multi-wavelength (MW) PTTs in an experiment inducing BP changes to 9 subjects. The results showed good absolute Pearson’s correlation coefficient between both MW PTT and systolic BP (R = 0.61, p = 0.08) as well as diastolic BP (R = 0.54, p = 0.05), pointing to feasibility of the proposed novel remote MW BP estimation via PTT. This was further confirmed in a leave-one-subject-out experiment, where a simple Random Forest regression model achieved mean absolute errors of 3.59 and 2.63 mmHg for systolic and diastolic BP respectively.

6 March 2021 in Sensors
Verified
Journal Article
Open access
PDF file
GSGašper Slapničar
Gašper Slapničar
Wenjin WangWenjin Wang
Wenjin Wang
Mitja LuštrekMitja Luštrek
Mitja Luštrek
Contact-free sensors offer important advantages compared to traditional wearables. Radio-frequency sensors (e.g., radars) offer the means to monitor cardiorespiratory activity of people without compromising their privacy, however, only limited information can be obtained via movement, traditionally related to heart or breathing rate. We investigated whether five complex hemodynamics scenarios (resting, apnea simulation, Valsalva maneuver, tilt up and tilt down on a tilt table) can be classified directly from publicly available contact and radar input signals in an end-to-end deep learning approach. A series of robust k-fold cross-validation evaluation experiments were conducted in which neural network architectures and hyperparameters were optimized, and different data input modalities (contact, radar and fusion) and data types (time and frequency domain) were investigated. We achieved reasonably high accuracies of 88% for contact, 83% for radar and 88% for fusion of modalities. These results are valuable in showing large potential of radar sensing even for more complex scenarios going beyond just heart and breathing rate. Such contact-free sensing can be valuable for fast privacy-preserving hospital screenings and for cases where traditional werables are impossible to use.

Vito JankoVito Janko
Vito Janko
GSGašper Slapničar
Gašper Slapničar
EDErik Dovgan
Erik Dovgan
Nina ReščičNina Reščič
Nina Reščič
TKTine Kolenik
Tine Kolenik
Mitja LuštrekMitja Luštrek
Mitja Luštrek
The COVID-19 pandemic affected the whole world, but not all countries were impacted equally. This opens the question of what factors can explain the initial faster spread in some countries compared to others. Many such factors are overshadowed by the effect of the countermeasures, so we studied the early phases of the infection when countermeasures had not yet taken place. We collected the most diverse dataset of potentially relevant factors and infection metrics to date for this task. Using it, we show the importance of different factors and factor categories as determined by both statistical methods and machine learning (ML) feature selection (FS) approaches. Factors related to culture (e.g., individualism, openness), development, and travel proved the most important. A more thorough factor analysis was then made using a novel rule discovery algorithm. We also show how interconnected these factors are and caution against relying on ML analysis in isolation. Importantly, we explore potential pitfalls found in the methodology of similar work and demonstrate their impact on COVID-19 data analysis. Our best models using the decision tree classifier can predict the infection class with roughly 80% accuracy.

18 April 2024 in Biomedical Optics Express
Verified
Journal Article
Closed access
GSGašper Slapničar
Gašper Slapničar
WWWenjin Wang
Wenjin Wang
MLMitja Luštrek
Mitja Luštrek
Single-site multi-wavelength (MW) pulse transit time (PTT) measurement was recently proposed using contact sensors with sequential illumination. It leverages different penetration depths of light to measure the traversal of a cardiac pulse between skin layers. This enabled continuous single-site MW blood pressure (BP) monitoring, but faces challenges like subtle skin compression, which importantly influences the PPG morphology and subsequent PTT. We extended this idea to contact-free camera-based sensing and identified the major challenge of color channel overlap, which causes the signals obtained from a consumer RGB camera to be a mixture of responses in different wavelengths, thus not allowing for meaningful PTT measurement. To address this, we propose novel camera-independent data-driven channel separation algorithms based on constrained genetic algorithms. We systematically validated the algorithms on camera recordings of palms and corresponding ground-truth BP measurements of 13 subjects in two different scenarios, rest and activity. We compared the proposed algorithms against established blind source separation methods and against previous camera-specific physics-based method, showing good performance in both PTT reconstruction and BP estimation using a Random Forest regressor. The best-performing algorithm achieved mean absolute errors (MAEs) of 3.48 and 2.61 mmHg for systolic and diastolic BP in a leave-one-subject-out experiment with personalization, solidifying the proposed algorithms as enablers of novel contact-free MW PTT and BP estimation.