Caixi Zhang

Prof. Caixi Zhang

School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2020 in Food Chemistry
Verified
Journal Article
Closed access
YWYusen Wu
Yusen Wu
WZWenwen Zhang
Wenwen Zhang
SSShiren Song
Shiren Song
WXWenping Xu
Wenping Xu
Caixi ZhangCaixi Zhang
Caixi Zhang
SWShiping Wang
Shiping Wang

Verified
Journal Article
Open access
PDF file
JWJiyuan Wang
Jiyuan Wang
ZGZhen Gao
Zhen Gao
HLHui Li
Hui Li
SJSongtao Jiu
Songtao Jiu
YQYueting Qu
Yueting Qu
Caixi ZhangCaixi Zhang
Caixi Zhang
Floral bud dormancy release of fruit tree species is greatly influenced by climate change. The lack of chilling accumulation often results in the occurrence of abnormal flower and low yields of sweet cherries (Prunus avium L.) in warm regions. To investigate the regulation of dormancy in sweet cherries, six DAM genes with homology to peach DAM, designated PavDAM1-6, have been identified and characterized. Phylogenetic analysis indicate that these genes are similar to DAMs in peach, apple and pear. The expression patterns of the PavDAMs in the low-chill cultivar ‘Royal Lee’ were different from that in the high-chill cultivar ‘Hongdeng’. ‘Royal Lee’ exhibits lower transcriptional level of PavDAM1 compared to ‘Hongdeng’, especially at the stage of chilling accumulation, and transcriptional levels of PavDAM4/5 were high in both cultivars during the endodormancy. Ectopic expression of PavDAM1 and PavDAM5 in Arabidopsis resulted in plants with abnormal flower and seed development, especially the PavDAM5. Higher transcriptional levels of SOC1 were observed in transgenic PavDAM1/5 lines, and ectopic expression of PavSOC1 had the similar floral phenotype. Further, protein interaction analysis demonstrated that PavDAM1/5 could interact with PavSOC1 in vivo and in vitro, which will help clarify the molecular mechanism of the flower development in sweet cherry or other fruit trees.

16 August 2010 in Journal of Experimental Botany
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Journal Article
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Caixi ZhangCaixi Zhang
Caixi Zhang
NTNaoya Tateishi
Naoya Tateishi
KTKenji Tanabe
Kenji Tanabe
To clarify the relationship between pollen density and gametophytic competition in Pyrus pyrifolia, gametophytic performance, gibberellin metabolism, fruit set, and fruit quality were investigated by modifying P. pyrifolia pollen grain number and density with Lycopodium spores. Higher levels of pollen density improved seed viability, fruit set, and fruit quality. Treatments with the highest pollen density showed a significantly increased fruit growth rate and larger fruit at harvest. High pollen density increased germination rate and gave a faster pollen tube growth, both in vivo and in vitro. Endogenous gibberellin (GA) concentrations increased in pollen tubes soon after germination and the concentration of two growth-active GAs, GA3, and GA4, was positively correlated to final fruit size, cell numbers in the mesocarp, and pollen tube growth rate. These two GAs appear to be biosynthesized de novo in pollen tube and are the main pollen-derived bioactive GAs found after pollen germination. GA1 levels in the pollen tube appear to be related to a pollen–style interaction that occurred after the pollen grains landed on the stigma.

3 January 2022 in BMC Plant Biology
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Journal Article
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ISIrfan Ali Sabir
Irfan Ali Sabir
MMMuhammad Aamir Manzoor
Muhammad Aamir Manzoor
ISIftikhar Hussain Shah
Iftikhar Hussain Shah
XLXunju Liu
Xunju Liu
MZMuhmmad Salman Zahid
Muhmmad Salman Zahid
Caixi ZhangCaixi Zhang
Caixi Zhang
Back ground: MYB Transcription factors (TFs) are most imperative and largest gene family in plants, which participate in development, metabolism, defense, differentiation and stress response. The MYB TFs has been studied in various plant species. However, comprehensive studies of MYB gene family in the sweet cherry (Prunus avium L.) are still unknown. Results: In the current study, a total of 69 MYB genes were investigated from sweet cherry genome and classified into 28 subfamilies (C1-C28 based on phylogenetic and structural analysis). Microcollinearity analysis revealed that dispersed duplication (DSD) events might play an important role in the MYB genes family expansion. Chromosomal localization, the synonymous (Ks) and nonsynonymous (Ka) analysis, molecular characteristics (pI, weight and length of amino acids) and subcellular localization were accomplished using several bioinformatics tools. Furthermore, the members of distinct subfamilies have diverse cis-acting regions, conserved motifs, and intron-exon architectures, indicating functional heterogeneity in the MYB family. Moreover, the transcriptomic data exposed that MYB genes might play vital role in bud dormancy. The quantitative real-time qRT-PCR was carried out and the expression pattern indicated that MYB genes significantly expressed in floral bud as compared to flower and fruit. Conclusion: Our comprehensive findings provide supportive insights into the evolutions, expansion complexity and functionality of PavMYB genes. These PavMYB genes should be further investigated as they seem to be brilliant candidates for dormancy manipulation in sweet cherry.

11 May 2007 in Plant Growth Regulation
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Caixi ZhangCaixi Zhang
Caixi Zhang
KTKenji Tanabe
Kenji Tanabe
FTFumio Tamura
Fumio Tamura
AIAkihiro Itai
Akihiro Itai
MYMasashi Yoshida
Masashi Yoshida

18 February 2020 in Frontiers in Genetics
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Journal Article
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SJSongtao Jiu
Songtao Jiu
YXYan Xu
Yan Xu
JWJiyuan Wang
Jiyuan Wang
LWLei Wang
Lei Wang
liu xunjuliu xunju
liu xunju
Caixi ZhangCaixi Zhang
Caixi Zhang
The cytochrome P450 (CYP) monooxygenase superfamily, belonging to heme-thiolate protein products, plays a vital role in metabolizing physiologically valuable compounds in plants. To date, CYP superfamily genes have not yet been characterized in grapevine (V. vinifera L.), and their functions remain unclear. In this study, a sum of 236 VvCYPs, divided into 46 families and clustered into nine clans, have been identified based on bioinformatics analyses in grapevine genome. The characteristics of both exon–intron organizations and motif structures further supported the close evolutionary relationships of VvCYP superfamily as well as the reliability of phylogenetic analysis. The gene number-based hierarchical cluster of CYP subfamilies of different plants demonstrated that the loss of CYP families seems to be limited to single species or single taxa. Promoter analysis elucidated various cis-regulatory elements related to phytohormone signaling, plant growth and development, as well as abiotic/biotic stress responses. The tandem duplication mainly contributed to the expansion of the VvCYP superfamily, followed by singleton duplication in grapevine. Global RNA-sequencing data of grapevine showed functional divergence of VvCYPs as diverse expression patterns of VvCYPs in various organs, tissues, and developmental phases, which were confirmed by quantitative real-time reverse transcription PCR (qRT-PCR). Taken together, our results provided valuable inventory for understanding the classification and biological functions of the VvCYPs and paved the way for further functional verification of these VvCYPs and are helpful to grapevine molecular breeding.