Jennifer A. Dionne

Jennifer A. Dionne


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 October 2019 in Nature Communications
Verified
Journal Article
Open access
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CHChi-Sing Ho
Chi-Sing Ho
NJNeal Jean
Neal Jean
CHCatherine A. Hogan
Catherine A. Hogan
LBLena Blackmon
Lena Blackmon
SJStefanie S Jeffrey
Stefanie S Jeffrey
JDJennifer A. Dionne
Jennifer A. Dionne
Raman optical spectroscopy promises label-free bacterial detection, identification, and antibiotic susceptibility testing in a single step. However, achieving clinically relevant speeds and accuracies remains challenging due to weak Raman signal from bacterial cells and numerous bacterial species and phenotypes. Here we generate an extensive dataset of bacterial Raman spectra and apply deep learning approaches to accurately identify 30 common bacterial pathogens. Even on low signal-to-noise spectra, we achieve average isolate-level accuracies exceeding 82% and antibiotic treatment identification accuracies of 97.0±0.3%. We also show that this approach distinguishes between methicillin-resistant and -susceptible isolates of Staphylococcus aureus (MRSA and MSSA) with 89±0.1% accuracy. We validate our results on clinical isolates from 50 patients. Using just 10 bacterial spectra from each patient isolate, we achieve treatment identification accuracies of 99.7%. Our approach has potential for culture-free pathogen identification and antibiotic susceptibility testing, and could be readily extended for diagnostics on blood, urine, and sputum.

5 November 2014 in The Journal of Physical Chemistry Letters
Verified
Journal Article
Closed access
DWDi M. Wu
Di M. Wu
AGAitzol García-Etxarri
Aitzol García-Etxarri
ASAlberto Salleo
Alberto Salleo
JDJennifer A. Dionne
Jennifer A. Dionne

26 December 2018 in ACS Photonics
Verified
Journal Article
Closed access
MSMichelle L. Solomon
Michelle L. Solomon
JHJack Hu
Jack Hu
MLMark Lawrence
Mark Lawrence
AGAitzol Garcia-Etxarri
Aitzol Garcia-Etxarri
JDJennifer A. Dionne
Jennifer A. Dionne

8 January 2020 in Accounts of Chemical Research
Verified
Journal Article
Closed access
MSMichelle L. Solomon
Michelle L. Solomon
ASAmr A. E. Saleh
Amr A. E. Saleh
LPLisa V. Poulikakos
Lisa V. Poulikakos
JAJohn M. Abendroth
John M. Abendroth
LTLoza F. Tadesse
Loza F. Tadesse
JDJennifer A. Dionne
Jennifer A. Dionne

24 February 2020 in Nature Materials
Verified
Journal Article
Closed access
PDF file
FHFariah Hayee
Fariah Hayee
LYLeo Yu
Leo Yu
JZJingyuan Linda Zhang
Jingyuan Linda Zhang
CCChristopher J. Ciccarino
Christopher J. Ciccarino
MNMinh Nguyen
Minh Nguyen
JDJennifer A. Dionne
Jennifer A. Dionne

17 August 2020 in Nature Nanotechnology
Verified
Journal Article
Closed access
PDF file
MLMark Lawrence
Mark Lawrence
DBDavid R. Barton
David R. Barton
JDJefferson Dixon
Jefferson Dixon
JSJung-Hwan Song
Jung-Hwan Song
JGJorik van de Groep
Jorik van de Groep
JDJennifer A. Dionne
Jennifer A. Dionne