Parasitoid wasps are important natural enemies of arthropod hosts in natural and agricultural ecosystems and are often associated with viruses or virion-like particles. Here, we report a novel negative-stranded RNA virus from a parasitoid wasp (Pteromalus puparum). The complete viral genome is 12,230 nucleotides in length, containing five non-overlapping, linearly arranged open reading frames. Phylogenetically, the virus clusters with and is a novel member of the mononegaviral family Nyamiviridae, here designated as Pteromalus puparum negative-strand RNA virus 1 (PpNSRV-1). PpNSRV-1 is present in various tissues and life stages of the parasitoid wasp, and is transmitted vertically through infected females and males. Virus infections in field populations of P. puparum wasps ranged from 16.7 to 37.5%, without linearly correlating with temperature. PpNSRV-1 increased adult longevity and impaired several fitness parameters of the wasp, but had no influence on successful parasitism. Strikingly, PpNSRV-1 mediated the offspring sex ratio by decreasing female offspring numbers. RNA interference knockdown of virus open reading frame I eliminated these PpNSRV-1-induced effects. Thus, we infer that PpNSRV-1 has complex effects on its insect host including sex ratio distortion towards males, as well as possible mutualistic benefits through increasing wasp longevity. Although a few viruses with RNA genomes have been discovered in parasitoid wasps, their numbers are limited and their effects on the wasps have rarely been determined. Unambiguous negative-sense, single-stranded RNA [(-)ssRNA] viruses in parasitoids wasps have not been described. In this report, we identify a novel (-)ssRNA virus from a parasitoid wasp, verify the presence of virion-like particles in various wasp tissues, and characterize the viral genomic structure, transcription strategy, phylogenetic relationship, transmission strategy, and biological impacts on its host. Most importantly, we reveal that this novel virus mediates secondary sex ratio of its host by decreasing female offspring numbers, and can be transmitted both by male and female to offspring. Decrease in female offspring could be due to increased female mortality or to alterations in the primary sex ratio. The reduced female offspring number per female could therefore be a fecundity cost or a tradeoff for increased longevity of the wasp. However, it remains to be determined whether increased longevity under laboratory conditions translates into increased lifetime fecundity for the wasp in nature. Increased longevity could be beneficial to the virus by promoting its transmission to more hosts. The secondary sex-ratio distortion induced by the virus may also increase its transmission in host populations, because males transmit the virus to their offspring and can mate with multiple females, thus further spreading the virus.