Unit of Computer Systems and Bioinformatics, Department of Engineering, Università Campus Bio-Medico of Rome, Via Alvaro del Portillo 21, 00128 Rome, Italy
Prof. Dr. Paolo Soda
Unit of Computer Systems and Bioinformatics, Department of Engineering, Università Campus Bio-Medico of Rome, Via Alvaro del Portillo 21, 00128 Rome, Italy
In this paper, we report on the first edition of the HEp-2 Cells Classification contest, held at the 2012 edition of the International Conference on Pattern Recognition, and focused on indirect immunofluorescence (IIF) image analysis. The IIF methodology is used to detect autoimmune diseases by searching for antibodies in the patient serum but, unfortunately, it is still a subjective method that depends too heavily on the experience and expertise of the physician. This has been the motivation behind the recent initial developments of computer aided diagnosis systems in this field. The contest aimed to bring together researchers interested in the performance evaluation of algorithms for IIF image analysis: 28 different recognition systems able to automatically recognize the staining pattern of cells within IIF images were tested on the same undisclosed dataset. In particular, the dataset takes into account the six staining patterns that occur most frequently in the daily diagnostic practice: centromere, nucleolar, homogeneous, fine speckled, coarse speckled, and cytoplasmic. In the paper, we briefly describe all the submitted methods, analyze the obtained results, and discuss the design choices conditioning the performance of each method.
Over the past few decades, the substantial growth in enterprise-data availability and the advancements in Artificial Intelligence (AI) have allowed companies to solve real-world problems using Machine Learning (ML). ML Operations (MLOps) represents an effective strategy for bringing ML models from academic resources to useful tools for solving problems in the corporate world. The current literature on MLOps is still mostly disconnected and sporadic. In this work, we review the existing scientific literature and we propose a taxonomy for clustering research papers on MLOps. In addition, we present methodologies and operations aimed at defining a ML pipeline to simplify the release of ML applications in industry. The pipeline is based on ten steps: business problem understanding, data acquisition, ML methodology, ML training & testing, continuous integration, continuous delivery, continuous training, continuous monitoring, explainability, and sustainability. The scientific and business interest and the impact of MLOps have grown significantly over the past years. The definition of a clear and standardized methodology for conducting MLOps projects is the main contribution of this paper.
Recent epidemiological data report that worldwide more than 53 million people have been infected by SARS-CoV-2, resulting in 1.3 million deaths. The disease has been spreading very rapidly and few months after the identification of the first infected, shortage of hospital resources quickly became a problem. In this work we investigate whether artificial intelligence working with chest X-ray (CXR) scans and clinical data can be used as a possible tool for the early identification of patients at risk of severe outcome, like intensive care or death. Indeed, further to induce lower radiation dose than computed tomography (CT), CXR is a simpler and faster radiological technique, being also more widespread. In this respect, we present three approaches that use features extracted from CXR images, either handcrafted or automatically learnt by convolutional neuronal networks, which are then integrated with the clinical data. As a further contribution, this work introduces a repository that collects data from 820 patients enrolled in six Italian hospitals in spring 2020 during the first COVID-19 emergency. The dataset includes CXR images, several clinical attributes and clinical outcomes. Exhaustive evaluation shows promising performance both in 10-fold and leave-one-centre-out cross-validation, suggesting that clinical data and images have the potential to provide useful information for the management of patients and hospital resources.