With pervasive applications of medical imaging in health-care, biomedical image segmentation plays a central role in quantitative analysis, clinical diagnosis, and medical intervention. Since manual annotation suffers limited reproducibility, arduous efforts, and excessive time, automatic segmentation is desired to process increasingly larger scale histopathological data. Recently, deep neural networks (DNNs), particularly fully convolutional networks (FCNs), have been widely applied to biomedical image segmentation, attaining much improved performance. At the same time, quantization of DNNs has become an active research topic, which aims to represent weights with less memory (precision) to considerably reduce memory and computation requirements of DNNs while maintaining acceptable accuracy. In this paper, we apply quantization techniques to FCNs for accurate biomedical image segmentation. Unlike existing literatures on quantization which primarily targets memory and computation complexity reduction, we apply quantization as a method to reduce overfitting in FCNs for better accuracy. Specifically, we focus on a state-of-the-art segmentation framework, suggestive annotation [26], which judiciously extracts representative annotation samples from the original training dataset, obtaining an effective small-sized balanced training dataset. We develop two new quantization processes for this framework: (1) suggestive annotation with quantization for highly representative training samples, and (2) network training with quantization for high accuracy. Extensive experiments on the MICCAI Gland dataset show that both quantization processes can improve the segmentation performance, and our proposed method exceeds the current state-of-the-art performance by up to 1%. In addition, our method has a reduction of up to 6.4x on memory usage.
5 August 2019 in IEEE Transactions on Pattern Analysis and Machine Intelligence
The 55th Design Automation Conference (DAC) held its first System Design Contest (SDC) in 2018. SDC'18 features a lower power object detection challenge (LPODC) on designing and implementing novel algorithms based object detection in images taken from unmanned aerial vehicles (UAV). The dataset includes 95 categories and 150k images, and the hardware platforms include Nvidia's TX2 and Xilinx's PYNQ Z1. DAC-SDC'18 attracted more than 110 entries from 12 countries. This paper presents in detail the dataset and evaluation procedure. It further discusses the methods developed by some of the entries as well as representative results. The paper concludes with directions for future improvements.