Yuichi Nakajima

Dr. Yuichi Nakajima

National Institute for Environmental Studies, Tsukuba, Japan
orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 February 2016 in Proceedings of the National Academy of Sciences
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Journal Article
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SMSatoshi Mitarai
Satoshi Mitarai
HWHiromi Watanabe
Hiromi Watanabe
YNYuichi Nakajima
Yuichi Nakajima
ASAlexander F. Shchepetkin
Alexander F. Shchepetkin
JMJames C. McWilliams
James C. McWilliams
Significance: Submarine hot springs known as hydrothermal vents host unique ecosystems of endemic animals that do not depend on photosynthesis. Quantifying larval dispersal processes is essential to understanding gene flows and diversity distributions of vent endemic species, as well as to protect vent communities from anthropological disturbances (e.g., deep-sea mining). In this study, we assess the potential frequency of larval exchange between vent fields throughout the entire western Pacific via ocean circulation processes, so that population geneticists can make quantitative comparisons. We show that western Pacific vents in distant basins are potentially connected with strong directionality. This article makes a valuable contribution to a difficult and important area of deep ocean processes.

16 June 2010 in PLOS ONE
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YNYuichi Nakajima
Yuichi Nakajima
ANAkira Nishikawa
Akira Nishikawa
AIAkira Iguchi
Akira Iguchi
KSKazuhiko Sakai
Kazuhiko Sakai
Recently, reef-building coral populations have been decreasing worldwide due to various disturbances. Population genetic studies are helpful for estimating the genetic connectivity among populations of marine sessile organisms with metapopulation structures such as corals. Moreover, the relationship between latitude and genetic diversity is informative when evaluating the fragility of populations. In this study, using highly variable markers, we examined the population genetics of the broadcast-spawning coral Acropora digitifera at 19 sites in seven regions along the 1,000 km long island chain of Nansei Islands, Japan. This area includes both subtropical and temperate habitats. Thus, the coral populations around the Nansei Islands in Japan are northern peripheral populations that would be subjected to environmental stresses different from those in tropical areas. The existence of high genetic connectivity across this large geographic area was suggested for all sites (FST≤0.033) although small but significant genetic differentiation was detected among populations in geographically close sites and regions. In addition, A. digitifera appears to be distributed throughout the Nansei Islands without losing genetic diversity. Therefore, A. digitifera populations in the Nansei Islands may be able to recover relatively rapidly even when high disturbances of coral communities occur locally if populations on other reefs are properly maintained.

27 November 2014 in Molecular Ecology
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YNYuichi Nakajima
Yuichi Nakajima
YMYu Matsuki
Yu Matsuki
CLChunlan Lian
Chunlan Lian
MFMiguel D. Fortes
Miguel D. Fortes
WUWilfredo H. Uy
Wilfredo H. Uy
KNKazuo Nadaoka
Kazuo Nadaoka

26 June 2015 in Aquatic Ecology
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Journal Article
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DADan M. Arriesgado
Dan M. Arriesgado
HKHiroyuki Kurokochi
Hiroyuki Kurokochi
YNYuichi Nakajima
Yuichi Nakajima
YMYu Matsuki
Yu Matsuki
WUWilfredo H. Uy
Wilfredo H. Uy
CLChunlan Lian
Chunlan Lian

27 August 2018 in Frontiers in Marine Science
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PEPeter J. Edmunds
Peter J. Edmunds
SMShelby E. McIlroy
Shelby E. McIlroy
MAMehdi Adjeroud
Mehdi Adjeroud
PAPut Ang
Put Ang
JBJessica L. Bergman
Jessica L. Bergman
SMSatoshi Mitarai
Satoshi Mitarai
Populations of marine organisms on coral reef islands (CRI) are connected in space and time by seawater that transports propagules of plants, animals, and algae. Yet, despite this reality, it is often assumed that routine replenishment of populations of marine organisms on CRI is supported by locally-sourced propagules (hereafter, larvae). Following large disturbances, however, distantly-sourced larvae from less disturbed CRI within a regional meta-population are likely to be important for local population recovery, but evaluating the roles of locally- vs. distantly-sourced larvae remains difficult. While larval sources are relatively well-known for some fishes, they remain virtually unknown for most taxa, particularly those associated with the benthos, as exemplified by scleractinian corals. This review focuses on reef recovery and larval connectivity. Using corals as examples, we argue that CRI can serve as natural laboratories in which studies of these issues can enhance understanding of coral reef community dynamics under future disturbance regimes. Rather than focusing on synthesizing empirical data, we focus on the capacity for CRI to realize their potential in this research area, concluding that progress is impeded by the limited breadth, detail, and spatio-temporal concordance of existing research. Using long-term observational programs of coral reefs in Mo'orea (French Polynesia), Okinawa (Japan), and St. John (US Virgin Islands) as examples of the data currently available, we make the case that new modes of multidisciplinary and collaborative research will be required to exploit the value of CRI in understanding the role of connectivity in mediating ecosystem resilience in a future affected by anthropogenic disturbances.

1 October 2020 in Molecular Phylogenetics and Evolution
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Journal Article
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PWPatricia H. Wepfer
Patricia H. Wepfer
YNYuichi Nakajima
Yuichi Nakajima
MSMakamas Sutthacheep
Makamas Sutthacheep
VRVeronica Z. Radice
Veronica Z. Radice
ZRZoe Richards
Zoe Richards
SMSatoshi Mitarai
Satoshi Mitarai