Oldest microfossils with methane-based metabolism in a subsurface environment expand the frontiers of early Earth habitability.

The Buck Reef is a 250–400 m thick sequence of banded black and white (B&W) cherts deposited ca. 3416 Ma ago in a shallow basin. We provide field, petrological and geochemical constraints on the chert-forming process and the origin of the banding. White layers consist of nearly pure microquartz, while black layers are mixed with detrital carbonaceous matter, quartz grains and carbonaceous microlaminae, interpreted as remnants of microbial mats. The circulation of Si-rich fluid is recorded by abundant chert veins and pervasive silicification. However, the high purity of the white layers, their lack of internal structures and extremely low Al, Ti and high-field-strength elements preclude an origin by silicification of sedimentary or volcanic precursors. Moreover, their reworking at the surface into slab conglomerates, and sediment-like contacts with black layers rule out a diagenetic origin. We propose a new model whereby the white layers were periodically deposited as precipitates of pure silica; and the micro-layering within the black layers formed by annual temperature fluctuations, favouring microbial activity in summer and inorganic silica precipitation in winter. Outcrop-scale alternation of B&W layers was associated with major, thousand-year-long climate events: white cherts represent massive silica precipitation resulting from changes in ocean circulation and temperature during cold intervals.

Sub-cellular trace element quantifications of nano-heterogeneities in brain tissues offer unprecedented ways to explore at elemental level the interplay between cellular compartments in neurodegenerative pathologies. We designed a quasi-correlative method for analytical nanoimaging of the substantia nigra, based on transmission electron microscopy and synchrotron X-ray fluorescence. It combines ultrastructural identifications of cellular compartments and trace element nanoimaging near detection limits, for increased signal-to-noise ratios. Elemental composition of different organelles is compared to cytoplasmic and nuclear compartments in dopaminergic neurons of rat substantia nigra. They exhibit 150–460 ppm of Fe, with P/Zn/Fe-rich nucleoli in a P/S-depleted nuclear matrix and Ca-rich rough endoplasmic reticula. Cytoplasm analysis displays sub-micron Fe/S-rich granules, including lipofuscin. Following AAV-mediated overexpression of α-synuclein protein associated with Parkinson’s disease, these granules shift towards higher Fe concentrations. This effect advocates for metal (Fe) dyshomeostasis in discrete cytoplasmic regions, illustrating the use of this method to explore neuronal dysfunction in brain diseases.

Deep-sea mud is rich in rare-earth elements, primarily found in fluorapatite, a mineral deposit that forms over hundreds of thousands to millions of years through the accumulation of fish remains. After fish die, biogenic apatite captures rare earth elements from seawater on the seafloor and from pore waters during the diagenesis process. The conventional model for rare earth element enrichment suggests that they are incorporated into the bioapatite crystal structure through solid-state diffusion. However, our data reveal that cerium atoms are instead precipitated within an amorphous layer surrounding bioapatite nanocrystals, as shown by high-energy-resolution X-ray absorption spectroscopy and transmission electron microscopy. Computational simulations further support this finding, predicting that cerium atoms cluster on the surface of fluorapatite. These results suggest that the fluorapatite-water interface plays a crucial role in the enrichment of cerium, as well as other rare earth elements, in marine sediments.

Sample preparation for element analysis of many biological tissues is difficult to achieve and prone to introduce contamination. Using x-ray fluorescence element microtomography (XFEMT) the element distribution on a virtual section across the sample can be determined with a resolution in the micrometer range. Fluorescence microtomograms of two plant samples are shown, demonstrating the possibility to map physiologically relevant ions, trace elements, and heavy metal pollutants at the cellular level. Attenuation effects inside the plant are corrected by a self-consistent tomographic reconstruction technique.