Hong-Gee Kim

Prof. Dr. Hong-Gee Kim


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 November 2020 in Cell
Verified
Journal Article
Closed access
KKKenta Kawasaki
Kenta Kawasaki
KTKohta Toshimitsu
Kohta Toshimitsu
MMMami Matano
Mami Matano
MFMasashi Fujita
Masashi Fujita
MFMasayuki Fujii
Masayuki Fujii
TSToshiro Sato
Toshiro Sato

13 March 2009 in Information Sciences
Verified
Journal Article
Closed access
HZHai-Tao Zheng
Hai-Tao Zheng
BKBo-Yeong Kang
Bo-Yeong Kang
HKHong-Gee Kim
Hong-Gee Kim

1 July 2025 in Computers in Biology and Medicine
Verified
Journal Article
Open access
SJSohyeon Jeon
Sohyeon Jeon
HKHong-Gee Kim
Hong-Gee Kim
Large language models (LLMs) hold transformative potential for clinical decision-making in the rapidly advancing field of AI in medicine. This study evaluates how Chain-of-Thought (CoT) prompting techniques affect medical reasoning performance with consideration for clinical applicability. Five LLMs (GPT-4o-mini, GPT-3.5-turbo, o1-mini, Gemini-1.5-Flash, Gemini-1.0-pro) were assessed via API access using CoT prompting methods exhibiting distinct cognitive characteristics. Evaluations included clinical datasets and non-clinical datasets. An iterative QA system was constructed to ensure consistent and reproducible results. o1-mini achieved the highest performance with 88.4 % accuracy in EHRNoteQA using MIMIC-IV discharge summaries. Traditional CoT consistently provided stable results across clinical datasets, while Interactive CoT showed variability - underperforming in complex medical reasoning tasks like MedMCQA (61.7 %) but performing well in clinical notes (83.5 % in EHRNoteQA). Statistical analysis revealed no significant differences between prompting methods across datasets (p > .05), though effect size analysis showed notable variations in method effectiveness. Complex prompting techniques do not significantly enhance performance compared to simpler approaches. Dataset characteristics and model architecture have greater impact, suggesting simpler CoT methods may be more effective for clinical applications.

8 December 2022 in Biomolecules
Verified
Journal Article
Open access
PDF file
MPMin-Koo Park
Min-Koo Park
JLJin-Muk Lim
Jin-Muk Lim
JJJinwoo Jeong
Jinwoo Jeong
YJYeongjae Jang
Yeongjae Jang
JLJi-Won Lee
Ji-Won Lee
KKKeun-Cheol Kim
Keun-Cheol Kim
Early diagnosis of lung cancer to increase the survival rate, which is currently at a low range of mid-30%, remains a critical need. Despite this, multi-omics data have rarely been applied to non-small-cell lung cancer (NSCLC) diagnosis. We developed a multi-omics data-affinitive artificial intelligence algorithm based on the graph convolutional network that integrates mRNA expression, DNA methylation, and DNA sequencing data. This NSCLC prediction model achieved a 93.7% macro F1-score, indicating that values for false positives and negatives were substantially low, which is desirable for accurate classification. Gene ontology enrichment and pathway analysis of features revealed that two major subtypes of NSCLC, lung adenocarcinoma and lung squamous cell carcinoma, have both specific and common GO biological processes. Numerous biomarkers (i.e., microRNA, long non-coding RNA, differentially methylated regions) were newly identified, whereas some biomarkers were consistent with previous findings in NSCLC (e.g., SPRR1B). Thus, using multi-omics data integration, we developed a promising cancer prediction algorithm.

24 September 2018 in BMC Medical Education
Verified
Journal Article
Open access
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YJYoungA Ji
YoungA Ji
SNSe Jin Nam
Se Jin Nam
HKHong-Gee Kim
Hong-Gee Kim
JLJaeil Lee
Jaeil Lee
Soo-Kyoung LeeSoo-Kyoung Lee
Soo-Kyoung Lee
As studies analyzing the networks and relational structures of research topics in academic fields emerge, studies that apply methods of network and relationship analysis, such as social network analysis (SNA), are drawing more attention. The purpose of this study is to explore the interaction of medical education subjects in the framework of complex systems theory using SNA and to analyze the trends in medical education. The authors extracted keywords using Medical Subject Headings terms from 9,379 research articles (162,866 keywords) published in 1963–2015 in PubMed. They generated an occurrence frequency matrix, calculated relatedness using Weighted Jaccard Similarity, and analyzed and visualized the networks with Gephi software. Newly emerging topics by period units were identified as historical trends, and 20 global-level topic clusters were obtained through network analysis. A time-series analysis led to the definition of five historical periods: the waking phase (1963–1975), the birth phase (1976–1990), the growth phase (1991–1996), the maturity phase (1997–2005), and the expansion phase (2006–2015). The study analyzed the trends in medical education research using SNA and analyzed their meaning using complex systems theory. During the 53-year period studied, medical education research has been subdivided and has expanded, improved, and changed along with shifts in society’s needs. By analyzing the trends in medical education using the conceptual framework of complex systems theory, the research team determined that medical education is forming a sense of the voluntary order within the field of medicine by interacting with social studies, philosophy, etc., and establishing legitimacy and originality.

1 January 2018 in The Journal of Advanced Prosthodontics
Verified
Journal Article
Open access
PDF file
SHSeung-Ryong Ha
Seung-Ryong Ha
HPHyun Sung Park
Hyun Sung Park
EKEung-Hee Kim
Eung-Hee Kim
HKHong-Gee Kim
Hong-Gee Kim
JYJin-Yong Yang
Jin-Yong Yang
In-Sung YeoIn-Sung Yeo
In-Sung Yeo
Ha SR, et al. J Adv Prosthodont. 2018 Dec;10(6):395-400. https://doi.org/10.4047/jap.2018.10.6.395