Syed Ahmad Chan Bukhari

Dr. Syed Ahmad Chan Bukhari

Division of Computer Science, Mathematics and Science, Collins College of Professional Studies, St. John's University, NY, USA
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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 August 2020 in Diagnostics
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Journal Article
Open access
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MKMuhammad Attique Khan
Muhammad Attique Khan
Imran AshrafImran Ashraf
Imran Ashraf
MAMajed Alhaisoni
Majed Alhaisoni
RDRobertas Damaševičius
Robertas Damaševičius
Rafal SchererRafal Scherer
Rafal Scherer
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
Manual identification of brain tumors is an error-prone and tedious process for radiologists; therefore, it is crucial to adopt an automated system. The binary classification process, such as malignant or benign is relatively trivial; whereas, the multimodal brain tumors classification (T1, T2, T1CE, and Flair) is a challenging task for radiologists. Here, we present an automated multimodal classification method using deep learning for brain tumor type classification. The proposed method consists of five core steps. In the first step, the linear contrast stretching is employed using edge-based histogram equalization and discrete cosine transform (DCT). In the second step, deep learning feature extraction is performed. By utilizing transfer learning, two pre-trained convolutional neural network (CNN) models, namely VGG16 and VGG19, were used for feature extraction. In the third step, a correntropy-based joint learning approach was implemented along with the extreme learning machine (ELM) for the selection of best features. In the fourth step, the partial least square (PLS)-based robust covariant features were fused in one matrix. The combined matrix was fed to ELM for final classification. The proposed method was validated on the BraTS datasets and an accuracy of 97.8%, 96.9%, 92.5% for BraTs2015, BraTs2017, and BraTs2018, respectively, was achieved.

7 October 2022 in Current Oncology
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Journal Article
Open access
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Sudhakar TummalaSudhakar Tummala
Sudhakar Tummala
Seifedine KadrySeifedine Kadry
Seifedine Kadry
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
Hafiz Tayyab RaufHafiz Tayyab Rauf
Hafiz Tayyab Rauf
The automated classification of brain tumors plays an important role in supporting radiologists in decision making. Recently, vision transformer (ViT)-based deep neural network architectures have gained attention in the computer vision research domain owing to the tremendous success of transformer models in natural language processing. Hence, in this study, the ability of an ensemble of standard ViT models for the diagnosis of brain tumors from T1-weighted (T1w) magnetic resonance imaging (MRI) is investigated. Pretrained and finetuned ViT models (B/16, B/32, L/16, and L/32) on ImageNet were adopted for the classification task. A brain tumor dataset from figshare, consisting of 3064 T1w contrast-enhanced (CE) MRI slices with meningiomas, gliomas, and pituitary tumors, was used for the cross-validation and testing of the ensemble ViT model’s ability to perform a three-class classification task. The best individual model was L/32, with an overall test accuracy of 98.2% at 384 × 384 resolution. The ensemble of all four ViT models demonstrated an overall testing accuracy of 98.7% at the same resolution, outperforming individual model’s ability at both resolutions and their ensembling at 224 × 224 resolution. In conclusion, an ensemble of ViT models could be deployed for the computer-aided diagnosis of brain tumors based on T1w CE MRI, leading to radiologist relief.

1 October 2019 in Data in Brief
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Journal Article
Open access
Hafiz Tayyab RaufHafiz Tayyab Rauf
Hafiz Tayyab Rauf
BSBasharat Ali Saleem
Basharat Ali Saleem
MLM. Ikram Ullah Lali
M. Ikram Ullah Lali
MKMuhammad Attique Khan
Muhammad Attique Khan
MSMuhammad Sharif
Muhammad Sharif
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
Plants are as vulnerable by diseases as animals. Citrus is a major plant grown mainly in the tropical areas of the world due to its richness in vitamin C and other important nutrients. The production of the citrus fruit has been widely affected by citrus diseases which ultimately degrades the fruit quality and causes financial loss to the growers. During the past decade, image processing and computer vision methods have been broadly adopted for the detection and classification of plant diseases. Early detection of diseases in citrus plants helps in preventing them to spread in the orchards which minimize the financial loss to the farmers. In this article, an image dataset citrus fruits, leaves, and stem is presented. The dataset holds citrus fruits and leaves images of healthy and infected plants with diseases such as Black spot, Canker, Scab, Greening, and Melanose. Most of the images were captured in December from the Orchards in Sargodha region of Pakistan when the fruit was about to ripen and maximum diseases were found on citrus plants. The dataset is hosted by the Department of Computer Science, University of Gujrat and acquired under the mutual cooperation of the University of Gujrat and the Citrus Research Center, Government of Punjab, Pakistan. The dataset would potentially be helpful to researchers who use machine learning and computer vision algorithms to develop computer applications to help farmers in early detection of plant diseases. The dataset is freely available at https://data.mendeley.com/datasets/3f83gxmv57/2.

16 November 2017 in Nature Immunology
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Journal Article
Closed access
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TCThe AIRR Community
The AIRR Community
FRFlorian Rubelt
Florian Rubelt
CBChristian E Busse
Christian E Busse
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
JBJean-Philippe Bürckert
Jean-Philippe Bürckert
SKSteven H Kleinstein
Steven H Kleinstein

1 March 2013 in Expert Systems with Applications
Verified
Journal Article
Closed access
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
ITInara Tusseyeva
Inara Tusseyeva
BLByung-Gil Lee
Byung-Gil Lee
YKYong-Gi Kim
Yong-Gi Kim

1 January 2020 in Pattern Recognition Letters
Verified
Journal Article
Closed access
MKMuhammad Attique Khan
Muhammad Attique Khan
MSMuhammad Sharif
Muhammad Sharif
TATallha Akram
Tallha Akram
Syed Ahmad Chan BukhariSyed Ahmad Chan Bukhari
Syed Ahmad Chan Bukhari
RNRamesh Sunder Nayak
Ramesh Sunder Nayak