Jason Berberich

Dr. Jason Berberich

orcid

Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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10 April 2015 in Biomacromolecules
Verified
Journal Article
Closed access
MFMartha M. Fitzgerald
Martha M. Fitzgerald
KBKatherine Bootsma
Katherine Bootsma
JBJason Berberich
Jason Berberich
JSJessica L. Sparks
Jessica L. Sparks

26 February 2016 in Biomacromolecules
Verified
Journal Article
Closed access
MLMelissa Lucius
Melissa Lucius
RFRebecca Falatach
Rebecca Falatach
CMCameron McGlone
Cameron McGlone
KMKatherine Makaroff
Katherine Makaroff
ADAlex Danielson
Alex Danielson
JBJason Berberich
Jason Berberich

1 June 2017 in Journal of the Mechanical Behavior of Biomedical Materials
Verified
Journal Article
Closed access
KBKatherine Bootsma
Katherine Bootsma
MFMartha M. Fitzgerald
Martha M. Fitzgerald
BFBrandon Free
Brandon Free
EDElizabeth Dimbath
Elizabeth Dimbath
JCJoe Conjerti
Joe Conjerti
JSJessica L. Sparks
Jessica L. Sparks

10 December 2014 in Chemical Communications
Verified
Journal Article
Closed access
PDF file
RFRebecca Falatach
Rebecca Falatach
CMCameron McGlone
Cameron McGlone
MWMohamed Sameer Al Abdul Wahid
Mohamed Sameer Al Abdul Wahid
SASaadyah Averick
Saadyah Averick
RPRichard C. Page
Richard C. Page
Dominik KonkolewiczDominik Konkolewicz
Dominik Konkolewicz
Hydrophilic polymers were attached to lysozyme by a combination of grafting-to and grafting-from approaches using RAFT polymerization. A hydrophilic oligomer was synthesized, and attached to the protein. The protein–oligomer hybrid contained the RAFT end group, enabling chain extension in solution. Lysozyme maintained activity throughout this process.

5 July 2018 in Polymers
Verified
Journal Article
Open access
PDF file
ADAlex P. Danielson
Alex P. Danielson
DVDylan Bailey Van-Kuren
Dylan Bailey Van-Kuren
JBJoshua P. Bornstein
Joshua P. Bornstein
CKCaleb T. Kozuszek
Caleb T. Kozuszek
JBJason Berberich
Jason Berberich
Dominik KonkolewiczDominik Konkolewicz
Dominik Konkolewicz
A detailed mechanistic and kinetic study of enzymatically initiated RAFT polymerization is performed by combining enzymatic assays and polymerization kinetics analysis. Horseradish peroxidase (HRP) initiated RAFT polymerization of dimethylacrylamide (DMAm) was studied. This polymerization was controlled by 2-(propionic acid)ylethyl trithiocarbonate (PAETC) in the presence of H2O2 as a substrate and acetylacetone (ACAC) as a mediator. In general, well controlled polymers with narrow molecular weight distributions and good agreement between theoretical and measured molecular weights are consistently obtained by this method. Kinetic and enzymatic assay analyses show that HRP loading accelerates the reaction, with a critical concentration of ACAC needed to effectively generate polymerization initiating radicals. The PAETC RAFT agent is required to control the reaction, although the RAFT agent also has an inhibitory effect on enzymatic performance and polymerization. Interestingly, although H2O2 is the substrate for HRP there is an optimal concentration near 1 mM, under the conditions studies, with higher or lower concentrations leading to lower polymerization rates and poorer enzymatic activity. This is explained through a competition between the H2O2 acting as a substrate, but also an inhibitor of HRP at high concentrations.

25 November 2024 in Microbial Cell Factories
Verified
Journal Article
Open access
PDF file
LCLuke M. Carter
Luke M. Carter
CMChris E. MacFarlane
Chris E. MacFarlane
SKSamuel P. Karlock
Samuel P. Karlock
TSTridwip Sen
Tridwip Sen
JKJoel L. Kaar
Joel L. Kaar
Jason T. BoockJason T. Boock
Jason T. Boock
Background: Depolymerizing polyethylene terephthalate (PET) plastics using enzymes, such as PETase, offers a sustainable chemical recycling route. To enhance degradation, many groups have sought to engineer PETase for faster catalysis on PET and elevated stability. Considerably less effort has been focused toward expressing large quantities of the enzyme, which is necessary for large-scale application and widespread use. In this work, we evaluated several E. coli strains for their potential to produce soluble, folded, and active IsPETase, and moved the production to a benchtop bioreactor. As PETase is known to require disulfide bonds to be functional, we screened several disulfide-bond promoting strains of E. coli to produce IsPETase, FAST-PETase and Hot-PETase. Results: We found expression in SHuffle T7 Express results in higher active expression of IsPETase compared to standard E. coli production strains such as BL21(DE3), reaching a purified titer of 20 mg enzyme per L of culture from shake flasks using 2xLB medium. We characterized purified IsPETase on 4-nitrophenyl acetate and PET microplastics, showing the enzyme produced in the disulfide-bond promoting host has high activity. Using a complex medium with glycerol and a controlled bioreactor, IsPETase titer reached 104 mg per L for a 46-h culture. FAST-PETase was found to be produced at similar levels in BL21(DE3) or SHuffle T7 Express, with purified production reaching 65 mg per L culture when made in BL21(DE3). Hot-PETase titers were greatest in BL21(DE3) reaching 77 mg per L culture. Conclusions: We provide protein expression methods to produce three important PETase variants. Importantly, for IsPETase, changing expression host, medium optimization and movement to a bioreactor resulted in a 50-fold improvement in production amount with a per cell dry weight productivity of 0.45 mgPETase gCDW−1 h−1, which is tenfold greater than that for K. pastoris. We show that the benefit of using SHuffle T7 Express for expression only extends to IsPETase, with FAST-PETase and Hot-PETase better produced and purified from BL21(DE3), which is unexpected given the number of cysteines present. This work represents a systematic evaluation of protein expression and purification conditions for PETase variants to permit further study of these important enzymes.