The analysis of human gait is an important tool in medicine and rehabilitation to evaluate the effects and the progression of neurological diseases resulting in neuromotor disorders. In these fields, the gold standard techniques adopted to perform gait analysis rely on motion capture systems and markers. However, these systems present drawbacks: they are expensive, time consuming and they can affect the naturalness of the motion. For these reasons, in the last few years, considerable effort has been spent to study and implement markerless systems based on videography for gait analysis. Unfortunately, only few studies quantitatively compare the differences between markerless and marker-based systems in 3D settings. This work presented a new RGB video-based markerless system leveraging computer vision and deep learning to perform 3D gait analysis. These results were compared with those obtained by a marker-based motion capture system. To this end, we acquired simultaneously with the two systems a multimodal dataset of 16 people repeatedly walking in an indoor environment. With the two methods we obtained similar spatio-temporal parameters. The joint angles were comparable, except for a slight underestimation of the maximum flexion for ankle and knee angles. Taking together these results highlighted the possibility to adopt markerless technique for gait analysis.
9 April 2015 in IEEE Transactions on Image Processing
In this paper, we propose a sparse coding approach to background modeling. The obtained model is based on dictionaries which we learn and keep up to date as new data are provided by a video camera. We observe that, without dynamic events, video frames may be seen as noisy data belonging to the background. Over time, such background is subject to local and global changes due to variable illumination conditions, camera jitter, stable scene changes, and intermittent motion of background objects. To capture the locality of some changes, we propose a space-variant analysis where we learn a dictionary of atoms for each image patch, the size of which depends on the background variability. At run time, each patch is represented by a linear combination of the atoms learnt online. A change is detected when the atoms are not sufficient to provide an appropriate representation, and stable changes over time trigger an update of the current dictionary. Even if the overall procedure is carried out at a coarse level, a pixel-wise segmentation can be obtained by comparing the atoms with the patch corresponding to the dynamic event. Experiments on benchmarks indicate that the proposed method achieves very good performances on a variety of scenarios. An assessment on long video streams confirms our method incorporates periodical changes, as the ones caused by variations in natural illumination. The model, fully data driven, is suitable as a main component of a change detection system.
13 September 2022 in Computer Methods and Programs in Biomedicine
Idiopathic pulmonary fibrosis, the archetype of pulmonary fibrosis (PF), is a chronic lung disease of a poor prognosis, characterized by progressively worsening of lung function. Although histology is still the gold standard for PF assessment in preclinical practice, histological data typically involve less than 1% of total lung volume and are not amenable to longitudinal studies. A miniaturized version of computed tomography (µCT) has been introduced to radiologically examine lung in preclinical murine models of PF. The linear relationship between X-ray attenuation and tissue density allows lung densitometry on total lung volume. However, the huge density changes caused by PF usually require manual segmentation by trained operators, limiting µCT deployment in preclinical routine. Deep learning approaches have achieved state-of-the-art performance in medical image segmentation. In this work, we propose a fully automated deep learning approach to segment right and left lung on µCT imaging and subsequently derive lung densitometry. Our pipeline first employs a convolutional network (CNN) for pre-processing at low-resolution and then a 2.5D CNN for higher-resolution segmentation, combining computational advantage of 2D and ability to address 3D spatial coherence without compromising accuracy. Finally, lungs are divided into compartments based on air content assessed by density. We validated this pipeline on 72 mice with different grades of PF, achieving a Dice score of 0.967 on test set. Our tests demonstrate that this automated tool allows for rapid and comprehensive analysis of µCT scans of PF murine models, thus laying the ground for its wider exploitation in preclinical settings.
Effective assisted living environments must be able to infer how their occupants interact in a variety of scenarios. Gaze direction provides strong indications of how a person engages with the environment and its occupants. In this paper, we investigate the problem of gaze tracking in multi-camera assisted living environments. We propose a gaze tracking method based on predictions generated by a neural network regressor that relies only on the relative positions of facial keypoints to estimate gaze. For each gaze prediction, our regressor also provides an estimate of its own uncertainty, which is used to weigh the contribution of previously estimated gazes within a tracking framework based on an angular Kalman filter. Our gaze estimation neural network uses confidence gated units to alleviate keypoint prediction uncertainties in scenarios involving partial occlusions or unfavorable views of the subjects. We evaluate our method using videos from the MoDiPro dataset, which we acquired in a real assisted living facility, and on the publicly available GazeFollow and Gaze360 datasets. Experimental results show that our gaze estimation network outperforms sophisticated state-of-the-art methods, while additionally providing uncertainty predictions that are highly correlated with the actual angular error of the corresponding estimates. Finally, an analysis of the temporal integration performance of our method demonstrates that it generates accurate and temporally stable gaze predictions.